Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme212845g00001 GTCAGGAAAAAGGTTCATAATGTAATTGATAAGTTTGCGGAGCGCGGACTTCGGTCTTTAGGTGTTGCAAGACAAGAAGTACCGGAGAGAACAAAAGATAGTCCTGGTGGACCGTGGCAATTTGTCGGTTTGCTACCGTTGTTTGATCCTCCTAGGCATGATAGTGCTGAAACAATTAGAAGAGCACTTAACCTTGGTGTGAATGTTAAGATGATTACTG 220 0.4318 VRKKVHNVIDKFAERGLRSLGVARQEVPERTKDSPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme212845g00001 73 PANTHER CALCIUM-TRANSPORTING ATPASE 2 73 - -
Trme212845g00001 73 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 54 IPR023299 GO:0000166
Trme212845g00001 73 Gene3D - 49 73 IPR023214 -
Trme212845g00001 73 Gene3D - 2 48 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme212845g00001 Trme-Chr212845 73 386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme212845g00001 1 73 Primary Pumps ATPases AT2G24520 89.041 1.82e-40 137