Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme212714g00001 ATGAAAGGTGATCGATACTTGAGACCATGGATTATCCCGGTTCCAGAGATTACTTTTACAACAAGAACTGATGAGGATGAGTGTTTAATTTTGGCAAGTGATGGACTTTGGGACGTAATGACGAATGATGAG 132 0.4015 MKGDRYLRPWIIPVPEITFTTRTDEDECLILASDGLWDVMTNDE 44
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme212714g00001 44 SUPERFAMILY PP2C-like 3 44 IPR036457 -
Trme212714g00001 44 Gene3D - 2 44 IPR036457 -
Trme212714g00001 44 PANTHER PROTEIN PHOSPHATASE 3 44 IPR015655 GO:0004722|GO:0006470
Trme212714g00001 44 Pfam Protein phosphatase 2C 3 44 IPR001932 -
Trme212714g00001 44 ProSiteProfiles PPM-type phosphatase domain profile. 1 44 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme212714g00001 Trme-Chr212714 19 377 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme212714g00001 3 43 PP2C-type Phosphatase Gene Family AT3G11410 73.171 6.27e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme212714g00001 K14497 - mnt:21394160 92.4337