Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21236g00001 TTCATCAATGCCTTCTTGTTCTTAATGGCCACAGTTCCTCTATCTGGTGGCCACATGAGCCCTGTTTTCACATGCATAGCTGCACTAAAAGGTGTCACATTGGCTTTTGACAAGAAAAGGTCAAAGAATATGGGCTTACCAATGGTATGTTTGGTGATAGCTGGGGCCATGGCATTGGCAGTATTTGTGTCGATAACGATAACGGGTCGGCCCGGTTATGCCGGTGTTGGGCTTAACCCGGCGAGATGCTTAGGCGCGGCATTACTGCATGGAGGCTCGTTATGGAATGGACATTGGGTTTTTTGGGTTGGGTCTATCATAGCTTGTTTAATCTATTATAGTGTCTCTATCAACCTGCCAAACGAGGGTTCAACTTTGGATGACGGAGAATATGTTGTCTTAAAGTTGGCTCGTGGTTCTCTTGATACTATTCGTAATGGTGATATTTCAAATGATATCACAATAGAACGAAGTGGCTTTCAAGAATATTTATCGTGTACTGCATAA 507 0.4359 FINAFLFLMATVPLSGGHMSPVFTCIAALKGVTLAFDKKRSKNMGLPMVCLVIAGAMALAVFVSITITGRPGYAGVGLNPARCLGAALLHGGSLWNGHWVFWVGSIIACLIYYSVSINLPNEGSTLDDGEYVVLKLARGSLDTIRNGDISNDITIERSGFQEYLSCTA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21236g00001 168 PANTHER AQUAPORIN-LIKE 1 32 - -
Trme21236g00001 168 SUPERFAMILY Aquaporin-like 6 111 IPR023271 -
Trme21236g00001 168 Gene3D Glycerol uptake facilitator protein. 31 119 IPR023271 -
Trme21236g00001 168 Pfam Major intrinsic protein 27 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21236g00001 35 111 Major Intrinsic Protein MIP AT3G53420 38.750 6.06e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21236g00001 K09866 - gmx:100804160 198.364