Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21214g00001 ATGGCTCGGGCTCTTGAAAGAACAGAAGAGGCATACATGGAAATGGCGGAGGATAATCTGCGCAAAAATCCAGAACAAGCTATAATGGGATCATGTGTTCTAGTGATGTTGATGAAGGATCAAGATGTTTATGTCATGAATCTGGGAGATAGTCGTGTGATTTTGGCTCAAGAAAAATCAAACGATCGTCATCTTAATTCAAGTTCTGTCAAGGATGACATGAGGCATAGAAATAGATCTAGAGAGTCATTAGTACGCATGGAGCTCGATAGGATTTCAGAGGAGTCCCCAATTCACAACCATAACAGTCATGTTATCAAGATGAACAAAAACCGCGAGATATCCTTTTGCAAAGTAAAAATGAGGGCTCTGCAGCTTTCTACAGATCACAGCACCAGTATTGAAGAGGAAGTTTTCAGAATAAGAGCAGAACACCCTGATGATAATCAAGCCATATTAAATGATCGAGTGAAAGGACATTTAAAAGTCACCAGAGCATTTGGTGCTGGGTTCTTGAAGAGG 522 0.4061 MARALERTEEAYMEMAEDNLRKNPEQAIMGSCVLVMLMKDQDVYVMNLGDSRVILAQEKSNDRHLNSSSVKDDMRHRNRSRESLVRMELDRISEESPIHNHNSHVIKMNKNREISFCKVKMRALQLSTDHSTSIEEEVFRIRAEHPDDNQAILNDRVKGHLKVTRAFGAGFLKR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21214g00001 174 Gene3D - 1 174 IPR036457 -
Trme21214g00001 174 PANTHER PROTEIN PHOSPHATASE 2C 3 173 IPR015655 GO:0004722|GO:0006470
Trme21214g00001 174 ProSiteProfiles PPM-type phosphatase domain profile. 1 174 IPR001932 -
Trme21214g00001 174 MobiDBLite consensus disorder prediction 59 78 - -
Trme21214g00001 174 Pfam Protein phosphatase 2C 10 62 IPR001932 -
Trme21214g00001 174 Pfam Protein phosphatase 2C 124 173 IPR001932 -
Trme21214g00001 174 SUPERFAMILY PP2C-like 3 173 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21214g00001 Trme-Chr21214 107 1247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21214g00001 1 174 PP2C-type Phosphatase Gene Family AT2G46920 69.143 6.95e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21214g00001 - - pcin:129315875 304.679