Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2120g00001 ATGTTGTTGCAGATGATTCCAAGGAATTTTGTAAAGAGATATTGGAAAGATGTATCAAATCCAATATCCCTTAGACTTCCAAACGAGTTTGTGTGCGAAATGTTTTGGGTGCAATGGGGTGATGAAATTTGGCTTCAGGATTGGAAAAGGTTTGCACAGTCGCTTAGATGCGGAGATCTTTTAGTTTTTCAATACAAAGGAGGATCAGATTTTAATGTCACTATATTTGATGATAGTAAATTAGAAATTGACTATTCAAGTATGATTTGCATCGATGAACAAGAAACTAAAGAGAGTGATGATGATGGTTATGTTGAGATTACAAATGAGGAGGCTAATGGAAACAGAGGAGGCAATGGTAAGAAAGCTAAGAAATGCTCAAAAACTGTAGATGCGAATAAGAGAAGCTGCACCGATGAGAATCCCAATTTCCTCTCAAATTATCGCGATTTTCTGTGGAAG 462 0.3658 MLLQMIPRNFVKRYWKDVSNPISLRLPNEFVCEMFWVQWGDEIWLQDWKRFAQSLRCGDLLVFQYKGGSDFNVTIFDDSKLEIDYSSMICIDEQETKESDDDGYVEITNEEANGNRGGNGKKAKKCSKTVDANKRSCTDENPNFLSNYRDFLWK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2120g00001 154 SUPERFAMILY DNA-binding pseudobarrel domain 5 78 IPR015300 -
Trme2120g00001 154 Gene3D - 3 80 IPR015300 -
Trme2120g00001 154 PANTHER B3 DOMAIN-CONTAINING 5 127 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2120g00001 6 134 B3 DNA Binding Superfamily AT3G18990 29.545 1.79e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2120g00001 - - tpra:123881551 223.402