Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21203g00001 CACGAAATCGATCATGTCAAAGAGATTGCTGAAAAGGTCCACGCTAATATAGCTCCTAAACCTTTACTTGTTGGTCAGAATCCAGTTGGACTTGATCAACACGTAGAAGAGGTGAAGTCACTTCTAGACTTGAAGCCAAATGGCAATACTGTATGCATGTTGGGCATAATTGGACTTGGCGGAATAGGAAAAACCGAACTTGCAAAAGCATTGTATAACAAGATTGCGCACCAATTTGAAGGTGCAAGTTTTCTTGGCAATGTTAGAGAGAAGTGGAACAAAATCAATGGCCCAGAAGATCTACAGAAGACCCTTTTATCAGAGATGTTTGAGCGGCCAGAAACTGAGTGGGGAAGTACAAGTAAAGGAATCACCGAAATAAAAAACAAGCTTGGAAGGAAAAAGGTTCTTTTGGTACTTGACGATGTTAATGCGATGAAACAATTAGAAAATTTGGCAGGAGGAAGTGATTGGTTTGGTCCAGGTAGTAGGATCATTATAACTACAAGGGACAAAGGTTTGTTCATTGGTACTTATCCAATAGAACTTAAGACTTATGAAATGACTGAACTTGATGATCAATTTTCTCTTGAGTTGTTTTGTCAAATTGCCTTTGGAACAAGCCATCCTAAAACAGAATATAAAGCTATATCATCTCGCGCGATTGGTTGTGCAAAAGGTCTTCCATTGGCTTTAAAAGTTATAGGCTCCAATTTGCGTACTAGAAAAAGTTTAAAAGCTTGGGAGGATGCATTGAAAGATTATGAGAGGATTCCCTGCGAAGAGATTCAAGATGTGCTTAAAGTAAGCTATAATGTGTTGGGTTCTAATGCACAAAGTGTTTTCCTAGATATAGCCTGCTTCTTCAAAGGGAAAAGAAAAGAATATGTTGAAGAAATACTTGAGGAATTCAGTGCAGCATCAAATATTGAAGAGCTTGTTAATAAATCTCTCTTGAATGTTGATAAT 969 0.3777 HEIDHVKEIAEKVHANIAPKPLLVGQNPVGLDQHVEEVKSLLDLKPNGNTVCMLGIIGLGGIGKTELAKALYNKIAHQFEGASFLGNVREKWNKINGPEDLQKTLLSEMFERPETEWGSTSKGITEIKNKLGRKKVLLVLDDVNAMKQLENLAGGSDWFGPGSRIIITTRDKGLFIGTYPIELKTYEMTELDDQFSLELFCQIAFGTSHPKTEYKAISSRAIGCAKGLPLALKVIGSNLRTRKSLKAWEDALKDYERIPCEEIQDVLKVSYNVLGSNAQSVFLDIACFFKGKRKEYVEEILEEFSAASNIEELVNKSLLNVDN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21203g00001 323 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 321 IPR044974 GO:0006952
Trme21203g00001 323 Gene3D - 10 178 IPR027417 -
Trme21203g00001 323 PRINTS Disease resistance protein signature 53 68 - -
Trme21203g00001 323 PRINTS Disease resistance protein signature 225 239 - -
Trme21203g00001 323 PRINTS Disease resistance protein signature 130 144 - -
Trme21203g00001 323 Pfam NB-ARC domain 32 274 IPR002182 GO:0043531
Trme21203g00001 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 285 IPR027417 -
Trme21203g00001 323 Gene3D - 190 275 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21203g00001 Trme-Chr21203 368 1336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21203g00001 29 321 WRKY Transcription Factor Family AT5G45050 32.203 2.70e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21203g00001 - - tpra:123882297 503.056