Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21186g00001 ATGATGAACAACAATAAGGTACCACCGAGACCTCGTACTAGAGTTGGGAAGTACGAGATGGGAAAAACAATTGGTGAAGGAAGTTTTGCAAAAGTGAAGTTAGCAAAGAATGTTGAAAATGGTGATTATGTTGCTATCAAAATTCTTGATCGTAATCATGTGCTTCGTCACAATATGATGGATCAG 186 0.3763 MMNNNKVPPRPRTRVGKYEMGKTIGEGSFAKVKLAKNVENGDYVAIKILDRNHVLRHNMMDQ 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21186g00001 62 SUPERFAMILY Protein kinase-like (PK-like) 9 54 IPR011009 -
Trme21186g00001 62 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Trme21186g00001 62 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 61 - -
Trme21186g00001 62 Gene3D Phosphorylase Kinase; domain 1 9 62 - -
Trme21186g00001 62 ProSiteProfiles Protein kinase domain profile. 18 62 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21186g00001 Trme-Chr21186 598 783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21186g00001 6 62 CBL-interacting serine-threonine protein kinases AT1G01140 66.667 2.34e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21186g00001 - - gmx:100794136 102.064