Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme211440g00001 CATTACAAGGGCACTGTTCTCAATGAAGAAAAGAGGGTGTTCTATGACACAAGAGTTGATAACGACGGTCAACCATTGGATTTCTGTTCTGGAGAAGGGCTGGTGCCAGAGGGATTTGAATTGTGTGTTCGTCTGATGCTACCAGGAGAGATGGCTCTTGTCACATGTCCGCCAGACTATGCTTATGATAAGTTTCCAAGGTTGTTGATGAAATTTTAG 219 0.4384 HYKGTVLNEEKRVFYDTRVDNDGQPLDFCSGEGLVPEGFELCVRLMLPGEMALVTCPPDYAYDKFPRLLMKF 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme211440g00001 72 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 62 IPR001179 GO:0003755
Trme211440g00001 72 SUPERFAMILY FKBP-like 1 65 - -
Trme211440g00001 72 Gene3D - 1 71 IPR046357 GO:0003755
Trme211440g00001 72 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 1 64 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme211440g00001 Trme-Chr211440 1 405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme211440g00001 1 62 Calmodulin-binding Proteins AT5G48570 40.323 3.96e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme211440g00001 - - tpra:123919523 146.362