Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21129g00001 TATTTTGTGTATCAGCTGTTACGAGGGCTCAAATACGTACATTCAGCAAATGTTTTGCACCGGGACCTCAAGCCTAGCAATTTGCTACTGAATGCTAATTGTGACCTTAAGATTGGAGACTTTGGTCTCGCTAGAACTACATCAGAAACAGATTTCATGACTGAGTACGTGGTTACTCGGTGGTATCGAGCTCCCGAACTGCTTCTTAATTGTTCAGAATATACAGCAGCCATTGATATTTGGTCTGTTGGTTGCATACTTGGTGAAATTGTAACAAGACAACCCCTCTTTCCTGGAAGAGATTATGTTCATCAGCTGAGACTGGTCACAGAGCTGATAGGTTCACCTGATGATGCTAGCCTTGGATTCCTACGCAGCGAAAATGCTCGTAGATACGTAAAACAGCTTCCACGATATCCAAAACAGAATTTTTCTACTAGGTTTCCCAACATGTCTCCAGGTGCTGTTGATTTGCTAGAGAAGATGCTTATCTTTGATCCAAGCAAGCGAATTAAAGTTGATGAGGCGTTGTGCCATCCATACATGGCACCTCTTCATGATATCAACGAGGAACCTGTATGTGC 584 0.4281 YFVYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIVTRQPLFPGRDYVHQLRLVTELIGSPDDASLGFLRSENARRYVKQLPRYPKQNFSTRFPNMSPGAVDLLEKMLIFDPSKRIKVDEALCHPYMAPLHDINEEPVCA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21129g00001 195 Gene3D Transferase(Phosphotransferase) domain 1 1 195 - -
Trme21129g00001 195 SMART serkin_6 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21129g00001 195 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 183 - -
Trme21129g00001 195 ProSiteProfiles Protein kinase domain profile. 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21129g00001 195 Pfam Protein kinase domain 2 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21129g00001 195 SUPERFAMILY Protein kinase-like (PK-like) 1 189 IPR011009 -
Trme21129g00001 195 FunFam Mitogen-activated protein kinase 1 195 - -
Trme21129g00001 195 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21129g00001 Trme-Chr21129 3 1337 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21129g00001 1 194 MAP Kinase Gene Family AT4G01370 89.175 6.58e-134 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trme21129g00001 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21129g00001 K20600 - tcc:18614093 383.259