Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21100g00002 AAGAGCAGAATTCATGATGTTGTCCTTGTTGGTGGATCAACAAGGATCGTAAAAGTGCAACAACTACTGAGTGATTTCTTTGAAGGGAAGGAATTATGCAATAGCATCAATGCCGATGAGGTGGTTGCATATGGTGCCGCTGTCCATGCTTCTATGTTGAGTGGGGAAATTAGCGAAAAGGTTCAAGATTTGAAATTGAGGGAGGTCATTCCTTTGTCCCTTGGATTCGAACTAATTGGAGGAATCATGAAAATAATGATTCCTAGGAATACCATATTTCCTATAAACATGGAAGAAGTATTCACCACACATTTAGACAACCAAATCAATATTGTCGTTAATGTTTATGAGGGTGAGAGGCAAATGATCAGGGACAACAACTTGCTTGGAACATTTGAGTTCAAAATTCCTCCAGTTCCGGCAGGTGTTNCAAATTAA 438 0.3927 KSRIHDVVLVGGSTRIVKVQQLLSDFFEGKELCNSINADEVVAYGAAVHASMLSGEISEKVQDLKLREVIPLSLGFELIGGIMKIMIPRNTIFPINMEEVFTTHLDNQINIVVNVYEGERQMIRDNNLLGTFEFKIPPVPAGVXN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21100g00002 145 PRINTS 70kDa heat shock protein signature 4 20 - -
Trme21100g00002 145 PRINTS 70kDa heat shock protein signature 63 82 - -
Trme21100g00002 145 PRINTS 70kDa heat shock protein signature 36 56 - -
Trme21100g00002 145 PANTHER HEAT SHOCK PROTEIN 70KDA 1 143 IPR013126 GO:0005524|GO:0140662
Trme21100g00002 145 SUPERFAMILY Actin-like ATPase domain 2 55 IPR043129 -
Trme21100g00002 145 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 50 145 IPR029047 -
Trme21100g00002 145 Gene3D - 1 36 - -
Trme21100g00002 145 Gene3D - 37 49 - -
Trme21100g00002 145 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 59 143 IPR029047 -
Trme21100g00002 145 Pfam Hsp70 protein 2 143 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21100g00002 Trme-Chr21100 901 1338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21100g00002 1 143 Calmodulin-binding Proteins AT1G16030 67.361 1.55e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21100g00002 K03283 - gmx:100798636 213.386