Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21100g00001 ATGATCAAAGAAGCTGAGAAGTACAAGGAAGAGGATAAAAGGTACAAGAAGAATGTAGAAGCAAGAAATGCACTGCAGAAGTATGCATACAACATGCGAAATGCCATAAATGATAAGGAAATTAGTTTGAAGCTTTCAGCAAAAGAAAAGAAAGAGATAGATGAAAAAATTGATTTGGTTTTAGTGTGGCTTGATGTCAATGTGGTTGCAGAACAACATGATTTTGAAAATTTCCAAAGACTTCTTTCAAGTGTCTTTGATCCAATTGTTATGAAGATGATAAAAGATGACGTGGGGAGTAGTGTGCAGCAAG 313 0.3514 MIKEAEKYKEEDKRYKKNVEARNALQKYAYNMRNAINDKEISLKLSAKEKKEIDEKIDLVLVWLDVNVVAEQHDFENFQRLLSSVFDPIVMKMIKDDVGSSVQQ 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21100g00001 104 Pfam Hsp70 protein 1 93 IPR013126 GO:0005524|GO:0140662
Trme21100g00001 104 Gene3D - 1 95 IPR029048 -
Trme21100g00001 104 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 20 95 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21100g00001 Trme-Chr21100 479 791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21100g00001 1 93 Calmodulin-binding Proteins AT5G02490 50.538 9.53e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21100g00001 K03283 - gmx:100783822 105.145