Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme210828g00001 ATGGAAGATATTACGTTAGAAGGGTACATAATTCCAGCTAAAACAAGATTTTTTGTCAATGCTTGGGCAATTGGTAGGAGTCCAGAAAGTTGGGAAGATCCCACTGCATTTAAACCAGAGAGATTTTTAGAGAGTAATATTGATTATAAGGGGCAAGATTTTGAGCTAATACCTTTTGGGGCAGGTAGAAGAGGTTGTCCGGCTATTACATTTGCCATTGCAGTTGTTGAGCTTGCTCTAGCTCAACTCCTTTATAGCTTTGATTGGGAGCTTCCTCCTTGTGTTTCAGCAGAAGACTTGGATCTCACTGAAGTTTTTGGAATCTCAATGCACAGAAGAGAAAATCTTCTGGTTGTTGCGAAGCCGTATACTT 373 0.4021 MEDITLEGYIIPAKTRFFVNAWAIGRSPESWEDPTAFKPERFLESNIDYKGQDFELIPFGAGRRGCPAITFAIAVVELALAQLLYSFDWELPPCVSAEDLDLTEVFGISMHRRENLLVVAKPYT 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme210828g00001 124 PANTHER OS08G0105600 PROTEIN 2 123 - -
Trme210828g00001 124 PRINTS E-class P450 group I signature 66 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme210828g00001 124 PRINTS E-class P450 group I signature 20 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme210828g00001 124 PRINTS E-class P450 group I signature 56 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme210828g00001 124 Pfam Cytochrome P450 2 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme210828g00001 124 SUPERFAMILY Cytochrome P450 1 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme210828g00001 124 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 59 68 IPR017972 GO:0005506|GO:0016705
Trme210828g00001 124 Gene3D Cytochrome P450 1 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme210828g00001 Trme-Chr210828 1 373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme210828g00001 1 123 Cytochrome P450 AT3G26330 51.220 5.11e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme210828g00001 - - gmx:100815921 219.935