Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21077g00001 ATGACTTCAGAAGTTGTTTTCCAAACATTCTCTCAATCAGAAACCAAACCCTCCACCGTGGCCACCACCGTTGCCACCACCAGTTCTGATCCCAATGCTCAACTTACCACCGTCAAAAGAAAAACCTCCTCTCGTTCCACCAAAGACCGTCACACCAAGGTGAACGGCCGTGGCCGCCGTGTCCGTATGCCGCCTCTCTGTGCTGCCAGAGTTTTCCAGCTGACACGTGAGTTAGGTCACCGTTCCGATGGTGAAACAATCGAGTGGCTTCTCCGACAAGCTGAGCCGGCTATCATCGCTGTCACTGGTACCGGCACTGTTCCCTCCGGTCCGGTTTCAACAACCTCGCCTGCGTCCTCTTTCTCCAAGCCGTCTGTGTCCTGCAATGTTGTTCCGCCGGTGTCGTCTGTTGGTCTCAACGGTAGTGGTATGTTTGCTGCTGCTGCTCTGCCGCTACAGCAGCCGAGTTGCCGGCTTGATCTCTGTCCGCCGTCTGGAATGGAGTATGCTGCGGCGA 517 0.5571 MTSEVVFQTFSQSETKPSTVATTVATTSSDPNAQLTTVKRKTSSRSTKDRHTKVNGRGRRVRMPPLCAARVFQLTRELGHRSDGETIEWLLRQAEPAIIAVTGTGTVPSGPVSTTSPASSFSKPSVSCNVVPPVSSVGLNGSGMFAAAALPLQQPSCRLDLCPPSGMEYAAA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21077g00001 172 Pfam TCP family transcription factor 46 121 IPR017887 -
Trme21077g00001 172 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 134 IPR005333 GO:0003700
Trme21077g00001 172 ProSiteProfiles TCP domain profile. 47 101 IPR017887 -
Trme21077g00001 172 MobiDBLite consensus disorder prediction 1 57 - -
Trme21077g00001 172 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21077g00001 Trme-Chr21077 1 517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21077g00001 24 110 TCP Transcription Factor Family AT1G69690 68.182 5.18e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trme21077g00001 TCP 7.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21077g00001 - - cam:101510590 212.231