Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21061g00001 GAGCCGAGTGAGCTAGTGAAGAAGTTTGGAGATGTGATACCAAAAGCCAACAATCTAGCCGGAACAAAATTAATTTTGAAATATCCAATTCCTCGTGAGAATGCAAAGCAACCTACAGCTGTAATAACAAGGACACTATACACTAGAAGAAAATTTGATTTACATTTTTACAAAGGGGAAAAGGTAGAAATTAGAAGCGATGAAAAAGGCTATGAAGGTTCGTGGTATACAGCAACTGTTGTTGATTTCTTGCATAATGGAAAGTACTTGGTGGAGTATTCGACACTGAAAACAGATGACTTAACAGAACAACTGAAAGAAGAAGTAAATGTTTCGGATATTAGACCGTGTCCGCCTGATGTTGATCGTTTTTGTCGATTTGTGACACGCCAAAGGGTTGATGTTTGGTATAATGATGGATGGTGGGAAGGTGTAGTATCTAATGTTGCTCATGGTTTCAATGGTTTCGAGTATAAGGTTTATTTTTGGACTTCAAATGAGGAGCTGGAATTTGAACATTGTTATCTTAGGCCTCATCAAGATTGGATTGATGGAAGATGGATGCTTGCTTCTTTGGTATGA 582 0.3797 EPSELVKKFGDVIPKANNLAGTKLILKYPIPRENAKQPTAVITRTLYTRRKFDLHFYKGEKVEIRSDEKGYEGSWYTATVVDFLHNGKYLVEYSTLKTDDLTEQLKEEVNVSDIRPCPPDVDRFCRFVTRQRVDVWYNDGWWEGVVSNVAHGFNGFEYKVYFWTSNEELEFEHCYLRPHQDWIDGRWMLASLV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21061g00001 193 SMART agenet_At_2 125 184 IPR014002 -
Trme21061g00001 193 SMART agenet_At_2 54 122 IPR014002 -
Trme21061g00001 193 CDD Tudor_Agenet_AtDUF_rpt2_4 131 178 - -
Trme21061g00001 193 Gene3D - 46 123 - -
Trme21061g00001 193 Pfam Agenet domain 59 119 IPR008395 -
Trme21061g00001 193 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 55 188 - -
Trme21061g00001 193 CDD Tudor_Agenet_AtDUF_rpt1_3 56 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21061g00001 Trme-Chr21061 752 1333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21061g00001 65 193 PHD Transcription Factor Family AT5G58610 30.128 2.55e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21061g00001 - - cam:101492247 287.345