Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21055g00001 ATGGTCCTGTCTCCAAGTTTGGAGAATCATATAGTCCCAACATATGAATTGTTGTATAGATTATTGCAATCAGACAAGGAAACTATTGATGTTGTAATTCATAATCCATATTTACTTAGTAACTGTCGTGTGCCACATAACATCACATTGTTGGTTGAGAATGGAGTGAAGGACTCAACCATTGGAAGATTGCTTCGGACGCATTCTCGGGCATTGGATACGAAGAAAACTTACATGCTAAAGTTGGTGAAGGAATTGAAGGATTTGGGTTTTAATCCTTCAAAAACAACCTTTGGTATAGCATTGGAAGCGAAACAATCGGTAAACAAAACATTGTGGAAAGAGAAAGTTGATGCCTTTAAGAAATGGGGGTGGTCTGATGAAGATGTTATAGAAGCATTTAGAAGGAACCCTCAATGTATGTTAACATCCATTGATAAAATTAATTTAGTGATGAGTTTTTGGGTCGATCAGTTGGGTTGGGATGCGCGTGCCCTTGCAAAAGGACCGTCGGCTTTAACAAATAGTTTGGAAAAAAGGATCATTCCAAGGGCCTCAGTAGCGCAATTTCTGCTGAAGAAAGGTTTGCGAAAAAAGACTGCAAGCTTAACCTGGCTAGTTGTTATGTCTGAGAAGTTGTTTCTTGATAG 650 0.3877 MVLSPSLENHIVPTYELLYRLLQSDKETIDVVIHNPYLLSNCRVPHNITLLVENGVKDSTIGRLLRTHSRALDTKKTYMLKLVKELKDLGFNPSKTTFGIALEAKQSVNKTLWKEKVDAFKKWGWSDEDVIEAFRRNPQCMLTSIDKINLVMSFWVDQLGWDARALAKGPSALTNSLEKRIIPRASVAQFLLKKGLRKKTASLTWLVVMSEKLFLD 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21055g00001 216 Gene3D Transcription termination factor 3, mitochondrial 1 216 IPR038538 -
Trme21055g00001 216 SMART mt_12 163 197 IPR003690 GO:0003690|GO:0006355
Trme21055g00001 216 SMART mt_12 62 92 IPR003690 GO:0003690|GO:0006355
Trme21055g00001 216 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Trme21055g00001 216 Pfam mTERF 111 215 IPR003690 GO:0003690|GO:0006355
Trme21055g00001 216 PANTHER CGI-12 PROTEIN-RELATED 4 215 IPR003690 GO:0003690|GO:0006355
Trme21055g00001 216 FunFam Mitochondrial transcription termination factor-like 7 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21055g00001 Trme-Chr21055 169 818 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trme21055g00001 mTERF 1.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21055g00001 K15031 - gmx:102667698 216.468