LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme21041g00001	GCTCGTCATGATTCTCTAAGGCCTGTGCCTTCTGTTCCAACACCTACTGTTCCAAAGCAGCTGCCAGCGAAAAATGATACAGGTGTCGCTGACCAATCTAAGGTTGGAGAGACTCATACTGGTACAAGGGCAAAAAAGGATACACAGGTGTCACCTTTACCCCCACCAAGCCTTATGCAGAATCATTCTGTTGTTCCTCTAACTGGAATGTCAATGCCATATCACCAGTCACAAGCACCCATGCACTTCGGTGCTGCTAATCCACAAATTCAATCTCATGGTATGTCAACAGCACCTCTTCAGATGCCTTTACAAATGCCTTTTCCAATTGGAAACGCTGCACAAGTGCAACAACAGGTATTTGTTCCAGGTCTTCAACCTCATCCTATCCATCCTCAAGGAATCATGCATCAACATCAAGGCCAAAATATAGGTTACATTCCTCAAATTGGTCATCAATTTCCCCATCAGTATGGCAACATGGGTATGGGCATCAACCCACAATATTCCCCACAGCAAGGAGGAAAATTTGCTGGGCCTCGTAAAACTACCCCTGTGAAAATAACTCACCCTGATACCCACGAAGAGCTTAGACTTGATAAAAGGGCAGATGATGGTGGGTCATCAGGTTCTAGGTCTCATTCTAGCAAGCCTTCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNACTCAGCCACCAAGAATTAATTATGCTGTGAGCCATGGTCCACAATTATCATCGCATAATACCCTGCCTGGCAATAAAATTGTCACTTCTATTCCTGGCAATGTTGAACAACGTAATCAAGAATTTTCCCGTGATATGCCTAATGCAATTTCATCAACTCCTTTAGGAGTATCTTCTGTATCTATAAAGCCAAGTGGTGGGGCTGGTGTTATGGACTCATCATTTGCCAATTCCAGTAATTCTAGTGATCAAAAGGGTGGATCTCCTAGTTCCTCAGTAACATCTAGTGATGTTTACTCTTTGGTGCCACCAAAAGGACCTGAAACTTGTTCTGAAATCTCTTCCCAACAATCTACTGCTGCATCTGTTTCTGCTGAGAAGCTTACATCAGCTTCCTTGTTGCCTTCTTCAACTGCTTTTAGTGAGAATTCTGTTTCAGCTCTTAATGAAGGCAGAAACAAGGAATCT	1167	0.4182	ARHDSLRPVPSVPTPTVPKQLPAKNDTGVADQSKVGETHTGTRAKKDTQVSPLPPPSLMQNHSVVPLTGMSMPYHQSQAPMHFGAANPQIQSHGMSTAPLQMPLQMPFPIGNAAQVQQQVFVPGLQPHPIHPQGIMHQHQGQNIGYIPQIGHQFPHQYGNMGMGINPQYSPQQGGKFAGPRKTTPVKITHPDTHEELRLDKRADDGGSSGSRSHSSKPSXXXXXXXXXXXXXXTQPPRINYAVSHGPQLSSHNTLPGNKIVTSIPGNVEQRNQEFSRDMPNAISSTPLGVSSVSIKPSGGAGVMDSSFANSSNSSDQKGGSPSSSVTSSDVYSLVPPKGPETCSEISSQQSTAASVSAEKLTSASLLPSSTAFSENSVSALNEGRNKES	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme21041g00001	389	MobiDBLite	consensus disorder prediction	342	383	-	-
	Trme21041g00001	389	MobiDBLite	consensus disorder prediction	1	63	-	-
	Trme21041g00001	389	MobiDBLite	consensus disorder prediction	304	332	-	-
	Trme21041g00001	389	MobiDBLite	consensus disorder prediction	157	389	-	-
	Trme21041g00001	389	MobiDBLite	consensus disorder prediction	187	208	-	-
	Trme21041g00001	389	MobiDBLite	consensus disorder prediction	244	293	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme21041g00001	Trme-Chr21041	174	1340	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme21041g00001	5	218	Eukaryotic Initiation Factors Gene Family	AT3G60240	43.750	7.31e-41	152

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme21041g00001	K03260		-	gmx:100796636	423.32