Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21034g00001 ATGTGTCGAAATAATACCCTGCCTCTTGTGCTCTATTTCAAAGCCTCGTCTGATTTTGCTCGTCTGAATTTTCAAGGGTTTTACACCGTGGTGCTGGAGAAACAGGATGTGTTAATATCTGTAGCATCTATCAGAGTGCATGGGACTTCAGTGGCAGAGATGCCTCTAATTGCAACTTGCAGTCGGTATCGCCGCCAAGGAATGTGCCGACGCCTTGTGAGCTCAATCGAAGAGATGTTAATGTCTGTCAAGGTAGAAAAGCTTGTGGTATCAGCCATTCCCGATCTGGTGGAGACATGGACCAAGGGCTTTGGTTTCGTACCTGTAG 328 0.4695 MCRNNTLPLVLYFKASSDFARLNFQGFYTVVLEKQDVLISVASIRVHGTSVAEMPLIATCSRYRRQGMCRRLVSSIEEMLMSVKVEKLVVSAIPDLVETWTKGFGFVPV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21034g00001 109 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 108 IPR016181 -
Trme21034g00001 109 Gene3D - 11 109 - -
Trme21034g00001 109 Pfam Acetyltransferase (GNAT) domain 25 107 IPR000182 GO:0016747
Trme21034g00001 109 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 109 IPR000182 GO:0016747
Trme21034g00001 109 PANTHER PHD FINGER PROTEIN 12 5 109 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21034g00001 Trme-Chr21034 179 1291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21034g00001 7 109 PHD Transcription Factor Family AT3G14980 73.786 5.06e-48 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21034g00001 - - mtr:25487250 183.341