Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme210200g00001 ATGTACAAAGTACTTTGGGAAGAGGGTCGTTTCGCCTCCGATGTTTTGGCTGGAATGGACCAAGCAATTATTGATGGTGTNNNNNNNNNTNNNNNNNNNNTGGGATTTGATGATACTCCACTTTTTGAAGATCCTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTATTGTTTCATCTTCTGCAGGTAATGCCGGACCTGACCTTGGAACCTTGCACAATGGTATCCCCTGGCTCATTACTGTTGCTGCAGGCACA 264 0.4091 MYKVLWEEGRFASDVLAGMDQAIIDGVXXXXXXXGFDDTPLFEDPIAIASFAAMEKGIIVSSSAGNAGPDLGTLHNGIPWLITVAAGT 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme210200g00001 88 Gene3D Peptidase S8/S53 domain 1 88 IPR036852 GO:0004252|GO:0006508
Trme210200g00001 88 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 88 IPR045051 -
Trme210200g00001 88 SUPERFAMILY Subtilisin-like 1 87 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme210200g00001 Trme-Chr210200 1 264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme210200g00001 2 88 Subtilisin-like Serine Gene Family AT2G05920 50.575 2.33e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme210200g00001 - - var:108328904 147.902