LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme21014g00001	ATGGTTTCTGCAATTGGAAATGATGGACCACTATATGGAACTTTGAATAATCCAGCAGATCAAAGTGATGTGATTGGTGTTGGCGGTATTGACTATAGTGACCATATAGCTTCCTTTTCCTCACGTGGCATGAGTACCTGGGAACTTCCTCATGGTTATGGCCGTGTGAAGCCAGACGTAGTTGCATATGGACGAGACATAATGGGATCAAAGATTAGTTCGGGTTGTAAAAGTTTATCAGGGACCAGTGTTGCAAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTCAGTGTCATTCCTGAACCTGATCGCAAAAATCTCTTAAATCCAGCAAGCATGAAACAAGCATTGGTCGAGGGTGCTGCAAAACTCGCTGGGCCTAACATGTACGAGCAGGGTGCTGGCAGAGTTGATCTGTTAGAATCATATGAGATTCTTAAGAGCTACAAACCGAGGGCAAGCATCTTTCCCAGTCTTCTTGATTACTCGGATTGTCCTTATACATGGCCCTTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCAGCATTTTAAATGGAATGG	583	0.446	MVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISSGCKSLSGTSVASPVVAGVVCLLVSVIPEPDRKNLLNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKSYKPRASIFPSLLDYSDCPYTWPFCRQPLYAGAMPVIFNASILNGM	194

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme21014g00001	194	Gene3D	Peptidase S8/S53 domain	1	154	IPR036852	GO:0004252\|GO:0006508
	Trme21014g00001	194	ProSitePatterns	Serine proteases, subtilase family, serine active site.	81	91	IPR023828	-
	Trme21014g00001	194	PANTHER	PEPTIDASE S8	1	136	-	-
	Trme21014g00001	194	SUPERFAMILY	Subtilisin-like	1	140	IPR036852	GO:0004252\|GO:0006508
	Trme21014g00001	194	Pfam	Subtilase family	1	128	IPR000209	GO:0006508\|GO:0008236
	Trme21014g00001	194	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	147	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme21014g00001	Trme-Chr21014	49	907	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme21014g00001	1	194	Subtilisin-like Serine Gene Family	AT5G19660	92.268	4.58e-127	374

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme21014g00001	K08653		-	gmx:100819188	382.874

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