Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2096g00002 ATGGTTTTCCGTTTAAATTCTATTCGACGGGCATCATTAACTGCCAATCAAGCAGCATCAAAATCTTTAGAAGTGAGAAAGGGCTATGTTGCGGTGTATGTTGGACAGAAACAGAAGCGGTTTGTGATCCCAATATCATATTTGAACCAACCATCATTTCAAGACTTATTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACTATTCCTTGCACCGAAGATATCTTCCAAAATATAACTTCTCGCTTCCGCTGGCTATGA 279 0.4122 MVFRLNSIRRASLTANQAASKSLEVRKGYVAVYVGQKQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDIFQNITSRFRWL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2096g00002 92 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Trme2096g00002 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2096g00002 Trme-Chr2096 1737 2015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2096g00002 2 83 Calmodulin-binding Proteins AT3G43120 41.463 1.29e-17 70.9