Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20920g00001 GTGTTTCTTCTGTGTCTTTTAAGTGGCTGTAGCATCTGCTGGTTCAACACAGTATGTTTTGTGCTCTGCATTAGGAATTTTCCGATTAACCGAACACTTGCATTATCACTTACTGTGAGTTTCAATGGTGTTAGTGCAGCCCTTTACACCCTTGCTGCCAATTCAATAGACCCTTCATCTGATTCACTGTATCTTCTTTTGAATGCTCTTGTTCCCCTTCTTGTTTGCATTGCAGCAGTTATTCCGATTCTTCGCCAACCGCCTTTANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNGCAACTGTTCTTCTCCTCACCCTCCCGTTGTTTATTCCTGGCATTATATATGCTCGCTCGTGGGCTCAGCGTACCATCCATTCCAGCTTTCGGATAGAAGGATCCAGCTTCATTCTTGTTCATGATGATGATCTTGAGCTGCATAAAGAACTACTTAGCCGTCACGGTAGTCTTGTTGGTAATGGAGATGGCAATGGAGATGCTTACAGCCTGCAAAMTGACAATGGATCCATGTTTTCAAGTCGGAAGGAAAGCGATAATGATGTGTGTTGTGAAAGGWTGATTGGCCAGGATCAGTTGACAATGCTAGGAGAAGAGCACTCAGCTGCAGTGATTGTCCGAAGATCAGATTTTTGGCTATACTACATTACATACTTCTGTGGAGGTACAATTGGTCTTGTCTATAGCAATAATCTGGGACAAATTGCTCAATCTTTAGGCCTGAGTTCAAGTACTTCTACCCTTGTTACTCTATATGCATCCTTTTCATTTTTCGGCCGCTTGCTTTCAGCTGTACCAGACTATATTCGTAG 941 0.3645 VFLLCLLSGCSICWFNTVCFVLCIRNFPINRTLALSLTVSFNGVSAALYTLAANSIDPSSDSLYLLLNALVPLLVCIAAVIPILRQPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVLLLTLPLFIPGIIYARSWAQRTIHSSFRIEGSSFILVHDDDLELHKELLSRHGSLVGNGDGNGDAYSLQXDNGSMFSSRKESDNDVCCERXIGQDQLTMLGEEHSAAVIVRRSDFWLYYITYFCGGTIGLVYSNNLGQIAQSLGLSSSTSTLVTLYASFSFFGRLLSAVPDYIR 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20920g00001 313 SUPERFAMILY MFS general substrate transporter 2 307 IPR036259 -
Trme20920g00001 313 Coils Coil 89 89 - -
Trme20920g00001 313 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 138 312 - -
Trme20920g00001 313 Pfam Nodulin-like 1 90 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20920g00001 Trme-Chr20920 354 1294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20920g00001 1 313 Nodulin-like Gene Family AT4G19450 55.031 7.46e-113 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20920g00001 - - cam:101496594 434.491