Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20913g00001 ATGGAAACTGAACCGGGGATTGATAAGTTGGTATATAATGTGTCTGGTTTGAGGGGTGCTTTGAAACCGTTAGTTAGGTGGGCGAAGAAGCAGATACCCGTGCATGCGCATAAGAGTACTTCTTTGTATCTTTATGCTACTGCTGGTGTTAGGAGACTTCCTAGGAAGGAGTCTAAGTGGTTGTTAGATAATGCTTGGTCTGTGATCAAGGATTCTCCTTTTTTGTGTAAGAAGGATTGGATTAAGATTATTTCTGGTACTGAGGAAGCTTATTTTGGATGGATATCACTTAATTATCATAGTCGTATTTTGGGTGTTAGTCCTAGGAAGGCGACTTATGGTGCACTTGATTTGGGGGGATCGTCGTTGCAGGTTACTTTTGAGAGTGATCAACAAGTTAATAGCGAGACTAGTTTGTATGTTAGGATTGGATCGGTGAACCATCATCTTACTGCGTATTCTCTTGAGGGTTATGGACTCAATGAGGCGTTTGGGAAGTCGGTGGCACATCTGTTTAAGAAAGAGTTTGGCTCATCAGCGGCCGATGCAGATATGGCTGGTAAAGATAGAGAGCTCAAGCATCCTTGTTTGCAATCTGGGTACAAGGCTCGATATGTGTGCCCTCGTTGTGGCAAAGGTGGAAGTCTTTCTGTTGGTGAGAAACGGTTGAGTAAGCAAGGTGGGTCAGGAACTCCGTTAATGCTTGTTGGTGCTCCTAATTGGCAACAATGCAGTGCACTTGCGAAAGTTGTCGTAAATTTGTCTGAATGGTCCAATCTCAGTCCAGGACTTGATTGYRGAATGACACCTTGTGCTTTGCAAGATAATCTCCCTCGCCCATATGGCCACTTTTACGTGATTTCTGGATTTTATGTTGTGTATCGGTTTTTCAACTTGTCTTCTGAAGCCACACTTGATGATGTGTTGAAAAAGGGTGAGGATTTCTGTGAAAAAAGATGGGATGTTGCGAAGAAAAGTGTTGTGCCTCAGCCCTTTATTGAGCAGTACTGCTTTAGGGCACCATACATTGCCTCACTCCTAAGAGAGGGTTTGCACATTAATGATAACCAAATATCTGTTGGCTCTGGCAGCATCACTTGGACACTTGGGGTTGCCTTGTTAGAAGCTGGGAAGGCATATTCCACTGGATTCGGGCTTCGTAACTTTGGAGTGCTCCAGATGAAGATAAATCCTCTT 1197 0.4369 METEPGIDKLVYNVSGLRGALKPLVRWAKKQIPVHAHKSTSLYLYATAGVRRLPRKESKWLLDNAWSVIKDSPFLCKKDWIKIISGTEEAYFGWISLNYHSRILGVSPRKATYGALDLGGSSLQVTFESDQQVNSETSLYVRIGSVNHHLTAYSLEGYGLNEAFGKSVAHLFKKEFGSSAADADMAGKDRELKHPCLQSGYKARYVCPRCGKGGSLSVGEKRLSKQGGSGTPLMLVGAPNWQQCSALAKVVVNLSEWSNLSPGLDCXMTPCALQDNLPRPYGHFYVISGFYVVYRFFNLSSEATLDDVLKKGEDFCEKRWDVAKKSVVPQPFIEQYCFRAPYIASLLREGLHINDNQISVGSGSITWTLGVALLEAGKAYSTGFGLRNFGVLQMKINPL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20913g00001 399 Pfam GDA1/CD39 (nucleoside phosphatase) family 2 374 IPR000407 GO:0016787
Trme20913g00001 399 Gene3D Exopolyphosphatase. Domain 2 86 362 - -
Trme20913g00001 399 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 378 IPR000407 GO:0016787
Trme20913g00001 399 Gene3D - 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20913g00001 Trme-Chr20913 1 1197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20913g00001 1 398 Nodulin-like Gene Family AT4G19180 62.095 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20913g00001 - - adu:107487370 663.685