Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme208327g00001 ATGGGGAAAAAATCAACGACGGAGGAAGTCAAACTGGAAATTCCGCCGGATAATCTCCGGTGCAGCCGCACCGACGGACGGCAATGGCGGTGCAAAAGAAGAGCGATGGAAAACGTGAAATTATGCGAGGCTCATTATCTTCAAGGAAAAATTCGGCAGAACAAAGAGAAGGTTCCAGAATCACTGAAGCTTCAAAGAAATATGAAGATGAAGAAGAGGAAGAAAAACGACGTCGTTGAAATTAGGTCAAAGAAGAAAAAGAAGAAGAAGAATGGTGATGTGCAATTGGAGTTGATAAGGATGGTGTTACAGAGAGAGGTTGATAAGAAGAAGA 334 0.4281 MGKKSTTEEVKLEIPPDNLRCSRTDGRQWRCKRRAMENVKLCEAHYLQGKIRQNKEKVPESLKLQRNMKMKKRKKNDVVEIRSKKKKKKKNGDVQLELIRMVLQREVDKKK 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme208327g00001 111 ProSiteProfiles WRC domain profile. 15 59 IPR014977 -
Trme208327g00001 111 PANTHER GROWTH-REGULATING FACTOR 5 15 84 IPR031137 GO:0005634|GO:0006351|GO:0032502
Trme208327g00001 111 Pfam WRC 16 57 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme208327g00001 Trme-Chr208327 96 429 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme208327g00001 16 55 GRF Transcription Factor Family AT2G22840 47.500 1.98e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme208327g00001 K15601 - gmx:100802129 108.612