Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20810g00001 ATGGTTCAAGGGCTTCCGGGAACTACATGTTGTAGAGGACCATTTGATGTTATCCGTCGAGTAGTGCATGCTGAGGGTTTTCGCGGCTTGTATAGAGGTTTTGGATTAACAGCTGTAACGCAATCTCCAGCATCTGCACTTTGGTGGGGATCATATGGTGCAGCACAACACATAATTTGGAGGAGTTTAGGCTACAAAGATGATACGGAGAAGAAGCCTTCACACGTGGAAATGGTGACAGTTCAGGCTACTGCCGGGATGGTGGCTGGTGCTTGTTCCTCTGTCATCACTACTCCCATAGATACTGTAAAAACACGACTTCAGGTTATGGACAACTATGGTTCTGGAAGACCATCAGTACTAAAGACAGCAAGAACTCTCCTTAAGGAAGATGGATGGTGGGGATTTTACAGAGGGTTTGGACCAAGATTTTTGAACATGTCACTTTATGGAACAACTATGATTGTTACTTATGAACTGATAA 484 0.4421 MVQGLPGTTCCRGPFDVIRRVVHAEGFRGLYRGFGLTAVTQSPASALWWGSYGAAQHIIWRSLGYKDDTEKKPSHVEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTARTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20810g00001 161 Pfam Mitochondrial carrier protein 14 60 IPR018108 -
Trme20810g00001 161 Pfam Mitochondrial carrier protein 81 160 IPR018108 -
Trme20810g00001 161 Gene3D Mitochondrial carrier domain 1 161 IPR023395 -
Trme20810g00001 161 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 161 - -
Trme20810g00001 161 SUPERFAMILY Mitochondrial carrier 7 160 IPR023395 -
Trme20810g00001 161 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 161 IPR018108 -
Trme20810g00001 161 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 58 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20810g00001 Trme-Chr20810 307 1289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20810g00001 1 161 Chloroplast and Mitochondria Gene Families AT5G15640 53.374 4.18e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20810g00001 K15121 - gmx:112997745 314.694