Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2079g00001 CAAGAGTTTGATCCTGGCGACCCAGAATCTCAGTTAGCATCTGTTACAACGAGGATTATGCAGGCTCTCCAGAATAACCTAGATGGAAAGTCTAAACTATATAAAGACCCAGGACTAACCCAGTTATTTCTTATGAACAATATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTGGGGGATGACTGGGTACAAATACACAGAAGAATTGTGCAACAGCATGCAAACCAGTATAAAAGGATCTCTTGGGCAAAGGTGTCCCAGCTTAACCAACTGGGCTACACCTTGGGGACTTCACTTGTGCAAGTTCGAATGAGGGTTGTAAGGCCTCCGGCTAGTGAGGTGCAACCCTTGAAGATCTTGCAGTGCCTCACTGTCCAAGGAACTAATTCATCTGGTGGAGGGGACAGCGGTGGACTTTCAAGAACAGCGGTTAAAGATAGGTTCAAGACATTTAACACTCAATTTGAGGAGCTTCATCAGAGACAATCTCAGTGGACTGTTCCAGATAGTGAGTTGCGCGAATCACTTAGACTGGCTGTTGCTGAAGTTTTGTTGCCTGCCTATAGATCTTTCCTTAAACGTTTTGGGCCCATGATTGAGAATGGCAAAAATCCTACAAAGTATATCAGATACTCTCCCGAGAATCTTGAACAAATGCTCGGTGAATTTTTCGAAAGCAAGGCGTGGAGCGAACAGAAGCGGTGA 723 0.4481 QEFDPGDPESQLASVTTRIMQALQNNLDGKSKLYKDPGLTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKVSQLNQLGYTLGTSLVQVRMRVVRPPASEVQPLKILQCLTVQGTNSSGGGDSGGLSRTAVKDRFKTFNTQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPTKYIRYSPENLEQMLGEFFESKAWSEQKR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2079g00001 240 Gene3D Exocyst complex component Exo70 1 240 - -
Trme2079g00001 240 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 231 IPR004140 GO:0000145|GO:0006887
Trme2079g00001 240 Pfam Exo70 exocyst complex subunit 6 227 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme2079g00001 240 SUPERFAMILY Cullin repeat-like 4 231 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2079g00001 Trme-Chr2079 1 1634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2079g00001 1 240 EXO70 exocyst subunit family AT5G52340 70.000 1.05e-115 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2079g00001 K07195 - qsa:O6P43_009662 352.443