LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme2079g00001	CAAGAGTTTGATCCTGGCGACCCAGAATCTCAGTTAGCATCTGTTACAACGAGGATTATGCAGGCTCTCCAGAATAACCTAGATGGAAAGTCTAAACTATATAAAGACCCAGGACTAACCCAGTTATTTCTTATGAACAATATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTGGGGGATGACTGGGTACAAATACACAGAAGAATTGTGCAACAGCATGCAAACCAGTATAAAAGGATCTCTTGGGCAAAGGTGTCCCAGCTTAACCAACTGGGCTACACCTTGGGGACTTCACTTGTGCAAGTTCGAATGAGGGTTGTAAGGCCTCCGGCTAGTGAGGTGCAACCCTTGAAGATCTTGCAGTGCCTCACTGTCCAAGGAACTAATTCATCTGGTGGAGGGGACAGCGGTGGACTTTCAAGAACAGCGGTTAAAGATAGGTTCAAGACATTTAACACTCAATTTGAGGAGCTTCATCAGAGACAATCTCAGTGGACTGTTCCAGATAGTGAGTTGCGCGAATCACTTAGACTGGCTGTTGCTGAAGTTTTGTTGCCTGCCTATAGATCTTTCCTTAAACGTTTTGGGCCCATGATTGAGAATGGCAAAAATCCTACAAAGTATATCAGATACTCTCCCGAGAATCTTGAACAAATGCTCGGTGAATTTTTCGAAAGCAAGGCGTGGAGCGAACAGAAGCGGTGA	723	0.4481	QEFDPGDPESQLASVTTRIMQALQNNLDGKSKLYKDPGLTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKVSQLNQLGYTLGTSLVQVRMRVVRPPASEVQPLKILQCLTVQGTNSSGGGDSGGLSRTAVKDRFKTFNTQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPTKYIRYSPENLEQMLGEFFESKAWSEQKR	240

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme2079g00001	240	Gene3D	Exocyst complex component Exo70	1	240	-	-
	Trme2079g00001	240	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	10	231	IPR004140	GO:0000145\|GO:0006887
	Trme2079g00001	240	Pfam	Exo70 exocyst complex subunit	6	227	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Trme2079g00001	240	SUPERFAMILY	Cullin repeat-like	4	231	IPR016159	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme2079g00001	Trme-Chr2079	1	1634	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme2079g00001	1	240	EXO70 exocyst subunit family	AT5G52340	70.000	1.05e-115	342

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme2079g00001	K07195		-	qsa:O6P43_009662	352.443

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