Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20793g00002 ATGAACCAAACTTCATTAGGTGATTTGTTCGAGAAAGATATGGTTAACGGATATACCAGAAGTCTTGAGTCAACCTCATCATCGCCGGCTTCAATTACCATTGAGAATTTTCTCAATGCCTTGTGGAATTTATCACCAAAGGTAATGGTTGTAACAGAACAAGACTCCAATCATAATGGTTCAACTCTTATGGACAGGCTACTAGAAGCTTTATACTCTTATGCAGCATTATTTGATTGTTTGGAATCAACAGTCCCAAGAACCTCATTGGAGAGATTAAGGGTGGAGAAGATGCTTTTCGGCGAGGAAATCAAGAACATTATTGCATGTGAGGGATTAGAAAGAAARGAAAGACATGAAAAGCTTGATAAGTGGTTTATGAGATTTGATTTTACTAGATTTGGTCATGTGCCTTTAAGTTATTTCGGTAGGTTGCAAGCAAGGAGGTTTCTGCAGAGTTGTGGTTGTGCAGGATATAAAATGAAGGAGGAAAATGGTTGTGTAGTAATATATTGGCAAGATAGGTCCTTGTTTTCAATATCAGCTTGGAGAGCTATGAAGTAA 564 0.3759 MNQTSLGDLFEKDMVNGYTRSLESTSSSPASITIENFLNALWNLSPKVMVVTEQDSNHNGSTLMDRLLEALYSYAALFDCLESTVPRTSLERLRVEKMLFGEEIKNIIACEGLERKERHEKLDKWFMRFDFTRFGHVPLSYFGRLQARRFLQSCGCAGYKMKEENGCVVIYWQDRSLFSISAWRAMK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20793g00002 187 ProSiteProfiles GRAS family profile. 1 184 IPR005202 -
Trme20793g00002 187 Pfam GRAS domain family 25 184 IPR005202 -
Trme20793g00002 187 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 179 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20793g00002 Trme-Chr20793 133 696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20793g00002 1 187 GRAS Transcription Factor Family AT1G50420 64.921 5.29e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme20793g00002 GRAS 9.9e-56 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20793g00002 - - gmx:100814131 306.605