Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme207643g00001 AAGACTGGCAACATTCTCTTAGATGATGATCTTCAGCCTAAAATTGCTGATTTTGGGTTGGCTAGGCTTCTACCAGAAGATCAATCTCATCTTAGCACAAGATTTGCAGGAACATTGGGATACACTGCACCAGAATATGCTATACATGGTCAGTTATCAGTGAAGGCTGATGCCTACAGTTTCGGTGTTGTAGTCCTAGAAATAATAAGCGGCCAAAAGAGTAGTGAGTTGAGGGAAGATGCTGATGGTGAATTCCTTCTTCAAAGGGTAAGCAATTTCTCTTTTCACTTTTAA 294 0.4048 KTGNILLDDDLQPKIADFGLARLLPEDQSHLSTRFAGTLGYTAPEYAIHGQLSVKADAYSFGVVVLEIISGQKSSELREDADGEFLLQRVSNFSFHF 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme207643g00001 97 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
Trme207643g00001 97 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 92 - -
Trme207643g00001 97 Pfam Protein kinase domain 1 76 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme207643g00001 97 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme207643g00001 97 SUPERFAMILY Protein kinase-like (PK-like) 1 73 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme207643g00001 Trme-Chr207643 2 382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme207643g00001 1 93 Receptor kinase-like Gene Family AT1G29740 54.000 2.03e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme207643g00001 Pkinase 2.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme207643g00001 - - gmx:100811953 166.007