Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme207577g00001 GCCTATTCTACGGTTGGAACACCTGATTATATTGCTCCAGAAGTTCTGTTGAAGAAAGGATATGGCGTGGAATGTGACTGGTGGTCTCTAGGAGCCATAATGTATGAAATGCTTGTTGGGTATCCGCCGTTTTATTCAGACGAACCAATGGCAACTTGTAGAAAGGTAATGTCCAGACTCTGGATCACATGTTGA 195 0.4359 AYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMATCRKVMSRLWITC 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme207577g00001 64 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 58 - -
Trme207577g00001 64 Pfam Protein kinase domain 3 55 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme207577g00001 64 Gene3D Transferase(Phosphotransferase) domain 1 4 58 - -
Trme207577g00001 64 ProSiteProfiles Protein kinase domain profile. 1 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme207577g00001 64 SUPERFAMILY Protein kinase-like (PK-like) 2 59 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme207577g00001 Trme-Chr207577 67 343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme207577g00001 1 58 AGC Kinase Gene Family AT2G20470 89.655 1.58e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Trme207577g00001 Pkinase 3.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme207577g00001 K08790 - zof:122042535 125.176