Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme207434g00001 | GGAGCTTGCAAGAAACCTCCAGTGTTCTGTATAATCACTGAATATATGGCTGGAGGCTCATTGAGAAAATACCTGCAACAACAAGGACCACATTCAGTTCCTCTCAAACTAGTTCTTGAATTAGCCCTTGACATTGCAAGGGGAATGCAATATCTTCATTCTCAAGGAATACTTCATAGGGATCTCAAATCAGAAAATCTGTTATTGGATGAAGAAATGTGTGTAAAAGTGGCAGATTTTGGTATCTCATGTTTAGAATCTCAAGCCGGCAGCGCGAAAGGATTCACCGGAACTTACCGTTGGATGGCGCCTGAAATGATCAGAGAAAAACGGCATACGAAAAAAGTAGATGTCTATAGTTTTGCCATAGTTCTATGGGAGCTAATAACAGGACTCACACCATTTGATAACATGACACCAGAACAAGC | 428 | 0.4089 | GACKKPPVFCIITEYMAGGSLRKYLQQQGPHSVPLKLVLELALDIARGMQYLHSQGILHRDLKSENLLLDEEMCVKVADFGISCLESQAGSAKGFTGTYRWMAPEMIREKRHTKKVDVYSFAIVLWELITGLTPFDNMTPEQA | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme207434g00001 | 143 | ProSiteProfiles | Protein kinase domain profile. | 1 | 143 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trme207434g00001 | 143 | PRINTS | Tyrosine kinase catalytic domain signature | 13 | 26 | IPR001245 | GO:0004672|GO:0006468 | |
Trme207434g00001 | 143 | PRINTS | Tyrosine kinase catalytic domain signature | 51 | 69 | IPR001245 | GO:0004672|GO:0006468 | |
Trme207434g00001 | 143 | PRINTS | Tyrosine kinase catalytic domain signature | 116 | 138 | IPR001245 | GO:0004672|GO:0006468 | |
Trme207434g00001 | 143 | PRINTS | Tyrosine kinase catalytic domain signature | 97 | 107 | IPR001245 | GO:0004672|GO:0006468 | |
Trme207434g00001 | 143 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 1 | 138 | - | - | |
Trme207434g00001 | 143 | Pfam | Protein tyrosine and serine/threonine kinase | 1 | 142 | IPR001245 | GO:0004672|GO:0006468 | |
Trme207434g00001 | 143 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 143 | - | - | |
Trme207434g00001 | 143 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 57 | 69 | IPR008271 | GO:0004672|GO:0006468 | |
Trme207434g00001 | 143 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 142 | IPR011009 | - | |
Trme207434g00001 | 143 | SMART | serkin_6 | 1 | 142 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme207434g00001 | Trme-Chr207434 | 3 | 430 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme207434g00001 | 1 | 143 | MAP Kinase Kinase Kinase | AT1G62400 | 69.930 | 1.06e-71 | 218 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Trme207434g00001 | PK_Tyr_Ser-Thr | 1.3e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme207434g00001 | - | - | gmx:100785212 | 273.478 |