Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2069g00001 GTTAAGGCATGGCTTGCTGACAAGGATGCTGAAGCACTGAGGTGCCAGAAACAATTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGAAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAGCAGCGGGCTAGGGAACAAAGAGACAAGCTTGAGGAAGAAACTAAAGGGAATGTTGACAGTACACTGAAGACTCTGTCACCAGCAGAAAGTTTTTTGGATACATATGATTTTGAAGCTCAAAATCCAGAGGAGTTTGCAAATAACACTCCTTCACATGTACCTATTCAATTCCCTGATGTCAATGAAGGAAAAGATGGGGATACTCCGTCTGGACTTGCTTTTGGCTCTGATCAGATTATTGGACAGTCAGAACGTGGACTTGATCATCCGTGCAGAGCAGTTGCAAGATGGCAGGAGCCTCCAAAATCCCCCCAACGCACGGTAGTCAGTGATCTACATACAAACAAGAATCCTCCAATTTTAAAGCCTGAAGTCATTCAGAGATATGGAACCTGCAATGATCATAGGGAAGATGCTATAGTTAATAATCATGAAGTTTTGATCGGATCTATATCCGTCAATCTAGGAAAATGCAGCCAATCAGAGGGTAATGTGGTGGCATCTCAAGAAGACTGCTCAGTTGAGAATGTGGATAACCAGAATAGTTCTCAGGATAAACCAAACAAACCTGATTTAGTCAAGAGTGGAAACAATCAAGCAACAGTTAAGACTTCAACACCAGTTAGTCAGTTTGAAACTAAAGATTCATTTCCAGTTCAAAGTCATGGGACAGAAATTGATGCTGGTAGTAGGGATGAAGGTTGTCAAAACTTGTCAAGGTTGGCTAGTGATGGTACCGATGTTGGTTTTAAAAAGATAATCTCCAATCTCGAGGGTCACGTAGATCCATTTCCAGTTAGTCAGTTTGAAACTAAAGATTCATTTCCAGTTCAAAGTCATGGGACAGAAGTTGATGCAGGTAGTAGAGATGAAGGTTGTCAAAACTTGTCAAGGTTGGCTAGTGATGGTAGCGATGTTGGTTTTAAAAACAAAATCTCCAATCTCGAGGGTCACGTAGATCCAGGGAAGTTCCAGTTTAACATCCAGGCTGCAAAAGCCTTTCTTGCACAAAGATGGGAAGAAGCTATATCATCAAATCATGTGAAATTGGTTATTTCTTATGACTCTGAACCTCCTGGGAGCCGGGAGATACAGGATTTGAAGGTAGCAGCAGCATGTAAATCTTCTGATGGTGATGATGGATGCAGCAACATTCCGGCAAAAACAGTTAACAAGTTGCTTTCAACTACCAAAGCTTCTAAGTCCAAACGCAGAGGGAGGTCTAAAAAGGGAACCGATTACAAGAATATTCCCAAAGAGGAAACAACCTAA 1410 0.4177 VKAWLADKDAEALRCQKQLVEEEEAAQKRQAEILKRKRQKKLRQKEQRAREQRDKLEEETKGNVDSTLKTLSPAESFLDTYDFEAQNPEEFANNTPSHVPIQFPDVNEGKDGDTPSGLAFGSDQIIGQSERGLDHPCRAVARWQEPPKSPQRTVVSDLHTNKNPPILKPEVIQRYGTCNDHREDAIVNNHEVLIGSISVNLGKCSQSEGNVVASQEDCSVENVDNQNSSQDKPNKPDLVKSGNNQATVKTSTPVSQFETKDSFPVQSHGTEIDAGSRDEGCQNLSRLASDGTDVGFKKIISNLEGHVDPFPVSQFETKDSFPVQSHGTEVDAGSRDEGCQNLSRLASDGSDVGFKNKISNLEGHVDPGKFQFNIQAAKAFLAQRWEEAISSNHVKLVISYDSEPPGSREIQDLKVAAACKSSDGDDGCSNIPAKTVNKLLSTTKASKSKRRGRSKKGTDYKNIPKEETT 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2069g00001 469 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 190 - -
Trme2069g00001 469 MobiDBLite consensus disorder prediction 45 64 - -
Trme2069g00001 469 MobiDBLite consensus disorder prediction 439 469 - -
Trme2069g00001 469 MobiDBLite consensus disorder prediction 215 278 - -
Trme2069g00001 469 MobiDBLite consensus disorder prediction 215 266 - -
Trme2069g00001 469 Coils Coil 10 62 - -
Trme2069g00001 469 MobiDBLite consensus disorder prediction 33 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2069g00001 Trme-Chr2069 483 2686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2069g00001 370 466 C2H2 Transcription Factor Family AT4G25610 32.990 1.31e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2069g00001 - - mtr:25496530 399.053