Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme206699g00001 CCAAATTCTGATAGCGGAAATGGAATAGATTCTGCTTTGACAGGAAATTCTGATCAAAATGACAGGCCTTCTAGTTCTAGAAAAAGGAAGGAAAAGAATGAAGATGATGTTGATGAGGAGAATGAGGATGATCATGATAATGATGATCCAACTGCACAAAAGAAGGCTCGAGTTGTTTGGACCCCTGCCTTACACCGCAAGTTTGTTGCTGCTGTTAATCAATTAGGCATCGACAAAGCTGTGCCGAAAAAGATTCTTGACTTGATGAATGTTGAAAAGCTTACAAGGGAGAATGTGGCAAGCCATCT 308 0.4058 PNSDSGNGIDSALTGNSDQNDRPSSSRKRKEKNEDDVDEENEDDHDNDDPTAQKKARVVWTPALHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme206699g00001 103 MobiDBLite consensus disorder prediction 1 21 - -
Trme206699g00001 103 Gene3D - 51 103 - -
Trme206699g00001 103 SUPERFAMILY Homeodomain-like 53 103 IPR009057 -
Trme206699g00001 103 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 103 IPR017930 -
Trme206699g00001 103 MobiDBLite consensus disorder prediction 1 54 - -
Trme206699g00001 103 Pfam Myb-like DNA-binding domain 57 102 IPR001005 -
Trme206699g00001 103 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 13 103 IPR044841 GO:0003700|GO:0006355
Trme206699g00001 103 FunFam Two-component response regulator 51 103 - -
Trme206699g00001 103 NCBIfam myb-like DNA-binding domain, SHAQKYF class 55 103 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme206699g00001 Trme-Chr206699 1 429 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme206699g00001 14 103 Response Regulator Gene Family AT4G31920 63.333 9.75e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trme206699g00001 Myb_DNA-binding 7.4e-06 CL0123