Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20666g00001 ATGGATAAACTTAAAATTTTGAATGTCAATGATTGTCAAAAGCTTAGGAGCATTCTACCTCTCAAGTTGGCTTCGCTTGAAGTACTCGATCTTTCATATTGTGATAGTCTTGATAATTTTTCACCTGTGGTGAATGGGTTTCTAGAGAAGCTTAAAATCTTTAGAGTTAAAAGTTTCAACAACTTTAAGTTTTTTCCACCTCTCAACCTGATTTCGCTAGAAGAACTCGATCTTTCTAATTGTGATAATCTGGTGAATTTTCCAGCCATGATGGTTGAGTTCCTGGGTTGTAGAAAGCTTAGTAGCATTCCACCTCTCAAGTTGGGTTCACTAGAAGAACTCGATCTTTCGTTTTGTGATAGTCTCGAGAATTTTCCACTTGTGGTAGATGGATCGCTGGATAAACTTAAAATCTTAAATGTTTCATTTTGCGAAAAGCTTAAGAGTATTCCTCCTCTGAAGTTTGGTTCACTACAAAAACTTGATATTTCACATTGTGACAATCTTGAAATTTTTCCACCCATGGTGGACGCGGTGCTTGGTAAACTTAAAATCTGA 558 0.3638 MDKLKILNVNDCQKLRSILPLKLASLEVLDLSYCDSLDNFSPVVNGFLEKLKIFRVKSFNNFKFFPPLNLISLEELDLSNCDNLVNFPAMMVEFLGCRKLSSIPPLKLGSLEELDLSFCDSLENFPLVVDGSLDKLKILNVSFCEKLKSIPPLKFGSLQKLDISHCDNLEIFPPMVDAVLGKLKI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20666g00001 185 Pfam Leucine Rich Repeat 72 84 IPR001611 GO:0005515
Trme20666g00001 185 Pfam Leucine Rich Repeat 157 174 IPR001611 GO:0005515
Trme20666g00001 185 SUPERFAMILY L domain-like 3 175 - -
Trme20666g00001 185 Gene3D Ribonuclease Inhibitor 1 93 IPR032675 -
Trme20666g00001 185 Gene3D Ribonuclease Inhibitor 94 183 IPR032675 -
Trme20666g00001 185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 96 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20666g00001 Trme-Chr20666 400 1130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20666g00001 43 173 WRKY Transcription Factor Family AT4G12020 30.247 7.18e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20666g00001 - - mtr:11443802 219.935