Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20660g00001 ATGTTCATTTTGAAAGAGCTGTTAATCAAAGGTGAATCCTATTCAGAGTACTTNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTTGTTTTCTATATTGCAGTCTGCTACCACTGCAGCAGAGGCTGAATTACCCCCCACCCATCCCATTCGATTGGGTCTGGCTTTGAATTTCTCAGTTTTCTATTATGAGATCTTGAATTCACCAGAAAGAGCCTGCCATCTTGCAAAGCAGGCTTTTGATGAAGCGATTTCAGAGCTTGACACCTTGAATGAGGAGTCCTACAAAGATAGTACCTTGATCATGCAACTTCTGAGGGACAATCTGACTCTCTGGACTTCTGACATCCCAGATGATGGAG 364 0.3874 MFILKELLIKGESYSEYXXXXXXXXXXXXLFSILQSATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPDDG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20660g00001 121 Pfam 14-3-3 protein 35 114 IPR023410 -
Trme20660g00001 121 SUPERFAMILY 14-3-3 protein 34 120 IPR036815 -
Trme20660g00001 121 PANTHER 14-3-3 PROTEIN 34 117 IPR000308 -
Trme20660g00001 121 Gene3D - 15 121 IPR036815 -
Trme20660g00001 121 SMART 1433_4 1 121 IPR023410 -
Trme20660g00001 121 Coils Coil 74 94 - -
Trme20660g00001 121 ProSitePatterns 14-3-3 proteins signature 2. 96 115 IPR023409 -
Trme20660g00001 121 PRINTS 14-3-3 protein zeta signature 33 59 IPR000308 -
Trme20660g00001 121 PRINTS 14-3-3 protein zeta signature 60 86 IPR000308 -
Trme20660g00001 121 PRINTS 14-3-3 protein zeta signature 87 116 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20660g00001 Trme-Chr20660 83 530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20660g00001 37 121 14-3-3 family AT2G42590 92.941 3.04e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20660g00001 K06630 - gmx:100801348 169.474