Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20656g00001 CGGGCTGCTCTGAGAAGGGAGAGAACTGGTGATGATGCATATGGGCGACCTGCTGGTGGAATTGCTGGAAATGTGCCATCTGCGCTTGCTAAAAATAGAGACATTGATGAAATTTTAAGGGTTGCAGATGAAATTCAAGACGATGATCCCACTGTTTCTCGAATATTATGTGAGCATGCCTATTCATTATCTCAAAATTTGGACCCCAATAGTGAAGGCCGAGGTGTTTTACAATTCAAGACCGGTTTGATGTCTGTCATTAAGCAAAAGCTGGCTAAAAGGGAAGTTGGAACCATAGATAGAAGTCAGGACATAGCCCGATTACAAGAGTTCTACAAGAGTTATAGAAAGAAGAATAATGTGGATAAATTACGTGAGGAGGAAATGCAGTTGAGGGAATCTGGTGCTTTCAGCCGGAATCTTGGCGA 428 0.4276 RAALRRERTGDDAYGRPAGGIAGNVPSALAKNRDIDEILRVADEIQDDDPTVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREVGTIDRSQDIARLQEFYKSYRKKNNVDKLREEEMQLRESGAFSRNLG 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20656g00001 142 MobiDBLite consensus disorder prediction 1 25 - -
Trme20656g00001 142 Gene3D - 21 139 IPR023175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20656g00001 Trme-Chr20656 19 1296 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20656g00001 2 141 Cell Wall Biosynthesis AT3G07160 77.143 2.74e-69 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20656g00001 K11000 - ccaj:109815119 266.929