Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20640g00001 ATGGAAGCAAAAGAGAACGAATATTTGAAGCAACTAAAAGTTGCCAAGAACACTGAAAATAGAATCAACTCAAATTCTGATGTATTCATGGCTAACAAATTTTCTTCAAAAGAGCAAAGCAAACAAAGTACAACACCAAAGTATGGAATGGATCTGAATAAGAATGACAACAGCAAGCCTTTACAATCTTTGAAGACAGAGAACTCCAAAGCTACAAAAAATAAGGATGTGAATATTAGTAATGTAAGTAAACCTACCGTGTTTCCCGATAAAGAGATAGATTGTATCATTATCGACGAAGATGACTACAAAGATCATTTCAAGGTTGATCTAGGAATGCCAGAAACAGCACCTAGTACAAAGACTAAAACATCATTGGAAGGAAAATGCAATTTGGCTGAGTCTTCAANNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTGACACTATGGATGAAGATGTGATACTACAAGCCAATGCTAAACAAGCTGAACCAATGGTTAACATTAGAAAGGAGTCACCATTAACAACTTCAAGTCCAGTGGATATATGCTTTTCTGGTGGATTGCTTGGTCCTGATGGAACTCAAAGATACTTGGGTAAATGGTGCAAGCGTGGACAAAATGGTGAATCAACATCCACAAAAGGGAATTTGATATCTGTAGGAGCTGATGGTAGAGGTGGCAAAGTCAAAGTTCTAAGGTCTCCTAGCCAAGCCTTCTCG 729 0.3567 MEAKENEYLKQLKVAKNTENRINSNSDVFMANKFSSKEQSKQSTTPKYGMDLNKNDNSKPLQSLKTENSKATKNKDVNISNVSKPTVFPDKEIDCIIIDEDDYKDHFKVDLGMPETAPSTKTKTSLEGKCNLAESSXXXXXXXXXXXXXDTMDEDVILQANAKQAEPMVNIRKESPLTTSSPVDICFSGGLLGPDGTQRYLGKWCKRGQNGESTSTKGNLISVGADGRGGKVKVLRSPSQAFS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20640g00001 243 Coils Coil 1 21 - -
Trme20640g00001 243 MobiDBLite consensus disorder prediction 30 72 - -
Trme20640g00001 243 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20640g00001 Trme-Chr20640 274 1327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20640g00001 170 240 C3H Transcription Factor Family AT4G01270 43.590 4.88e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20640g00001 K11985 - gmx:100812811 234.958