Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20626g00001 ATGGCTACAGAAGCAAGAGCAAAGTTCCAAAACCCAGATTTCCGACCCGATTTCCAAACCCTAACGCCGTCAACTCACGACGGTCTTCACTTCTGGCAGTTCATGATTGCCGGATCCATCGCCGGTTGCATAGAACACATGGCAATGTTTCCGGTTGACACCGTTAAAACTCACATGCAAGCAATCACATCATGTCCAATTCGATCCGTTTCAGTTCGTCAAGCTTTCCGTTCAATTCTTCAATCGGAAGGTCCCTCGGCRTTATACCGTGGTATCGGTGCAATGGGCCTTGGCGCGGGCCCGGCACACGCCGTTTATTTTTCGGTTTATGAGACTTGTAAAAAAAAGTTCTCACAAGGGAACCCTAATAATGCTGTTGCTCATGCTGCTTCTGGTGTTTGCGCCACGGTTGCGAGTGACGCTGTTTTTACGCCGATGGATATGGTGAAACAGAGGTTGCAGTTGAGTAATAGTGGTTATAAAGGTGTTTTTGATTGTGTTAAGAGGGTTATGAGTGAGGAAGGGTTTGGAGCTTTTTATGCTAGTTATAGGACTACTGTTTTAATGAATGCGCCTTTTACGGCTGTGCATTTCGCGACTTATGAGGCAGCTAAACGGGGATTGAATGAGGTTTCGCCGGAGAGTGTTGATGATGAACGGTTGATTATTCATGCTACGGCTGGTGCTGCAGCGGGTGGTTTGGCTGCTGCTGTTACAACACCACTTGATGTTGTTAAAACTCAATTGCAGTGTCAG 756 0.4683 MATEARAKFQNPDFRPDFQTLTPSTHDGLHFWQFMIAGSIAGCIEHMAMFPVDTVKTHMQAITSCPIRSVSVRQAFRSILQSEGPSALYRGIGAMGLGAGPAHAVYFSVYETCKKKFSQGNPNNAVAHAASGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVFDCVKRVMSEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLNEVSPESVDDERLIIHATAGAAAGGLAAAVTTPLDVVKTQLQCQ 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20626g00001 252 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 252 IPR018108 -
Trme20626g00001 252 SUPERFAMILY Mitochondrial carrier 27 252 IPR023395 -
Trme20626g00001 252 Gene3D Mitochondrial carrier domain 13 215 IPR023395 -
Trme20626g00001 252 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 116 IPR018108 -
Trme20626g00001 252 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 207 IPR018108 -
Trme20626g00001 252 PANTHER MITOFERRIN-1-RELATED 24 252 - -
Trme20626g00001 252 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Trme20626g00001 252 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Trme20626g00001 252 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Trme20626g00001 252 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Trme20626g00001 252 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Trme20626g00001 252 Pfam Mitochondrial carrier protein 221 252 IPR018108 -
Trme20626g00001 252 Pfam Mitochondrial carrier protein 29 119 IPR018108 -
Trme20626g00001 252 Pfam Mitochondrial carrier protein 124 210 IPR018108 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20626g00001 1 252 Chloroplast and Mitochondria Gene Families AT1G07030 73.846 5.82e-128 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20626g00001 K15113 - gmx:100802640 448.743