Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme206214g00001 ATGAAAGCACTTAAAGAAGCAGAAGAAAAAAGAAAAGTAATGGATGCGTTGGTAAATGTAGATGTCAGGTATAGAAAGTATACAATTGAGGAGATTGAAGCTGCAACAGAATTTTTTTCGAAGTCTCTCAAGATTGGAGAAGGAGGATATGGTCCAGTTTTTAGGTGTCTTCTGGACCATACACCTGTTGCAGTTAAGGTTCTTCGTCCTGATGCAGCACAAGGAAGGTCACAGTTTCAAAGAGAGGTAAGCATACAAACAAAACGCTACACACAACAGATAATTGAGGGAATTTTATTCTGTAAACTATTACTGATCAATACGCTTGAAGTGAGTGTGCAATTCACTTCAAGGATTCCAAAGCATCTCGAAGGATTCGCA 381 0.3858 MKALKEAEEKRKVMDALVNVDVRYRKYTIEEIEAATEFFSKSLKIGEGGYGPVFRCLLDHTPVAVKVLRPDAAQGRSQFQREVSIQTKRYTQQIIEGILFCKLLLINTLEVSVQFTSRIPKHLEGFA 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme206214g00001 127 SUPERFAMILY Protein kinase-like (PK-like) 22 88 IPR011009 -
Trme206214g00001 127 Gene3D Phosphorylase Kinase; domain 1 23 107 - -
Trme206214g00001 127 PANTHER OS02G0152300 PROTEIN 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme206214g00001 Trme-Chr206214 8 388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme206214g00001 1 85 Receptor kinase-like Gene Family AT5G12000 65.882 1.38e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trme206214g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme206214g00001 - - gmx:100803867 154.066