Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20612g00001 ATGAAAGTATGCTGTGTCAAGGTATCTGAGGCGGGCGAGAACTTCAGTGTTGGACAGAGGCAACTGTTGAGTCTTGCCAGGGCTTTGTTGCGGAGATCGAAGATTTTAGTACTTGATGAGGCAACTGCAGCGGTTGATGTTAGAACAGATGCACTCATACAGAAAACAATCAGGGAGGAATTTAAATCCTGTACAATGCTCATTATTGCTCATCGCCTCAACACTATTATTGATTGTGATCGGGTTCTTTTGCTTGATGGAGGCAAGGTTCTTGAATATGATACCCCCGAGGAGCTCTTGTCAAATGAGGGTAGTGCTTTCTCTAAGATGGTGCAAAGTACAGGAGCTGCAAATGCCCAATACTTACGCAGCTTAGTACACGGTGGGGACAAGACAGAAAGAGAAGAGAACAAGAATCTGGATGGTCAGAGAAAATGGCTAGCTTCTTCTCGGTGGGCTGCTGCAGCCCAGTTTGCTCTTGCTGTGAGTCTCACTTCGTCACAGAATGACCTACAACGTTTGGAAGTAGAAGATGAGAATAGTATTCTCAAGAAGACAAAGGATGCTCTCATAACTTTGCAGGGTGTTTTGGAAAGGAAGCATGATAAAGAAATTGAGGAATCTTTAAACCAACGCCAAATATCCTCTGAGGGATGGTGGACATCGCTTTACAAGATG 678 0.444 MKVCCVKVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRVLLLDGGKVLEYDTPEELLSNEGSAFSKMVQSTGAANAQYLRSLVHGGDKTEREENKNLDGQRKWLASSRWAAAAQFALAVSLTSSQNDLQRLEVEDENSILKKTKDALITLQGVLERKHDKEIEESLNQRQISSEGWWTSLYKM 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20612g00001 226 FunFam AGAP012735-PA 1 116 - -
Trme20612g00001 226 Pfam ABC transporter 8 43 IPR003439 GO:0005524
Trme20612g00001 226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 110 IPR027417 -
Trme20612g00001 226 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 9 118 - -
Trme20612g00001 226 Gene3D - 6 127 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20612g00001 Trme-Chr20612 1 931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20612g00001 7 118 Calmodulin-binding Proteins AT2G36910 40.708 4.52e-17 77.8