Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme205709g00001 ATGCTTCCATCTGGGTATCTAGTTCGACCGTGTGAAGGTGGAGGATCAGTTATTCATATTGTTGATCATGTGAACCTTGAGGCGTGGAGCGTACCTGAG 99 0.4747 MLPSGYLVRPCEGGGSVIHIVDHVNLEAWSVPE 33
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme205709g00001 33 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 33 IPR044830 GO:0003700
Trme205709g00001 33 SUPERFAMILY Bet v1-like 1 32 - -
Trme205709g00001 33 Pfam START domain 1 32 IPR002913 GO:0008289
Trme205709g00001 33 ProSiteProfiles START domain profile. 1 33 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme205709g00001 Trme-Chr205709 40 219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme205709g00001 1 33 Homeobox Transcription Factor Family AT5G60690 81.818 6.52e-17 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme205709g00001 K09338 - han:110927068 72.7886