Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20565g00001 ATGACACTTCTTCTCAAGTTTCAATCAGGATCATCGCGTGGAAGATTTGTTCTAGCTCATAAAGAATTTTCAAACCAACAGTTTAGAGGGCTTAATGTTATTTTAGCCGATGATGATAATGTAAACATGACTGTAACAAAGAAGCTACTTGAGAAGCTAGGTTGTCAAGTAACTGCTGTTTCATCGGGTTTTGATTGTTTGGCTGCTATAACTGCCTCCAGTGTATCATTTAAAGTCATCCTATTGGATCTTCACATGCCTGAAATGGATGGTTTTGAAGTTGCAAGGAAGATTCGGAAGTTCCAAAGCCGAAATTGGCCCTTGATTATTGCTCTTACAGCAAGTGCAGAAGAACACATAAAGGAAAGATGCCTTCAGGTGGGAATGAATGGATTGATTCGAAAACCTATCCTCCTTCACGAGTTAGCTGATGAACTTAAAACAGTCCTGCTACGTGCAGGTGAAAAATTCTAA 474 0.3924 MTLLLKFQSGSSRGRFVLAHKEFSNQQFRGLNVILADDDNVNMTVTKKLLEKLGCQVTAVSSGFDCLAAITASSVSFKVILLDLHMPEMDGFEVARKIRKFQSRNWPLIIALTASAEEHIKERCLQVGMNGLIRKPILLHELADELKTVLLRAGEKF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20565g00001 157 FunFam Ethylene receptor 29 153 - -
Trme20565g00001 157 SUPERFAMILY CheY-like 27 150 IPR011006 -
Trme20565g00001 157 CDD REC_ETR-like 31 146 - -
Trme20565g00001 157 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
Trme20565g00001 157 Gene3D - 16 151 - -
Trme20565g00001 157 Pfam Response regulator receiver domain 33 146 IPR001789 GO:0000160
Trme20565g00001 157 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 1 153 - -
Trme20565g00001 157 SMART REC_2 31 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20565g00001 Trme-Chr20565 656 1129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20565g00001 1 155 Miscellaneous Gene Families AT3G04580 59.627 1.46e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trme20565g00001 Response_reg 1.6e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20565g00001 K14509 - gmx:100805023 258.84