Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2053g00001 ATGGGTCATTGGCAGAGTATTATTGAATCCCTCAACACTATTCTCTGTACTATGAAAGAGAACTTTGTGCCTCCTGTCCTTGTCCAAAAGATCTTCTCTCAAACATTTTCATATATTAATGTTCAACTCTTCAACAGTCTTCTTCTGCGGCGTGATTGTTGCACATTCAGCAATGGAGAATATGTGAAGGCTGGTTTAGCAGAATTGGAGCTGTGGTGCTGCCAAGCAAAGGAGGAGTATGCTGGGACATCTTGGGATGAGCTCAAGCACATTAGACAGGCAGTTGGATTCTTGGTTATCCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCT 351 0.4103 MGHWQSIIESLNTILCTMKENFVPPVLVQKIFSQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGTSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCP 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2053g00001 117 ProSiteProfiles Dilute domain profile. 1 117 IPR002710 -
Trme2053g00001 117 SMART DIL_2 30 116 IPR002710 -
Trme2053g00001 117 Pfam DIL domain 30 117 IPR002710 -
Trme2053g00001 117 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 3 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2053g00001 Trme-Chr2053 152 2292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2053g00001 3 117 Myosins gene family AT5G43900 83.478 3.05e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2053g00001 K10357 - gmx:100786893 242.276