Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20526g00001 ATGCATGTTGGACATAGACATGCTTACAATCTTAAGTGTCCGGGAACCGGCATTAACTTCTCAAATCTTACTCGCTCAGCGATTTATTCTCTTGTCTTCGGAGAGGAAGTTGCAGCGAAATCTACATCAAAAACAGCAGCTAGGAACTGTTATCCTGGATCACTAGATAACAAAAAAGTTGCAGGAAAGATTGTTATTTGTGTTACCGATGATCAAAATATTACACGGAATATAAAGAAGCTAATTGTGCAAGATGCGGGAGCCATGGGGATGATACTCATTGAGAAGGAAAACATAGATGTTCCCTTTGATGCAGGTCTATTTCCCTTCATAGAGGTTGGCAATCTTGAAGGGTATCAAATCCTTAAGTCCATAAAATCTACCAAGAAACCAACTGCAACAATTCTTACAACTACAGAAATTCCTAGATATCGGCCTACACCAATTGTTGCATCTTTCTCATCCAGAGGTCCTTCAAGCCTTACTGAAAACATTCTCAAGCCGGATGTCATGGCTCCAGGAGTTTCGATATTGGCAGCTCTGATTCCTAAAAAAGAAAATGTTCCAATTGGGAAAAAACCATCCATGTTTGGCTTAAAATCTGGTACATCTATGGCTTGCCCTCATGT 629 0.4006 MHVGHRHAYNLKCPGTGINFSNLTRSAIYSLVFGEEVAAKSTSKTAARNCYPGSLDNKKVAGKIVICVTDDQNITRNIKKLIVQDAGAMGMILIEKENIDVPFDAGLFPFIEVGNLEGYQILKSIKSTKKPTATILTTTEIPRYRPTPIVASFSSRGPSSLTENILKPDVMAPGVSILAALIPKKENVPIGKKPSMFGLKSGTSMACPHV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20526g00001 210 SUPERFAMILY Subtilisin-like 142 210 IPR036852 GO:0004252|GO:0006508
Trme20526g00001 210 Pfam Subtilase family 146 210 IPR000209 GO:0006508|GO:0008236
Trme20526g00001 210 Pfam PA domain 47 98 IPR003137 -
Trme20526g00001 210 Gene3D - 23 142 - -
Trme20526g00001 210 Gene3D Peptidase S8/S53 domain 143 210 IPR036852 GO:0004252|GO:0006508
Trme20526g00001 210 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 210 IPR045051 -
Trme20526g00001 210 CDD PA_subtilisin_like 15 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20526g00001 Trme-Chr20526 1 1313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20526g00001 15 210 Subtilisin-like Serine Gene Family AT1G20150 41.117 2.43e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20526g00001 K25898 - gmx:100809885 273.863