Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20497g00001 GCTCGTCCCTCACTTGTGGTGATCCATGATATGAATCCTCATTGGGAGAAGTGTCCGTATTTTGTTTATAAGATGTTGTTTGACCTGAAGAAACCTTCTCATCCTACTCGTGGAGTTCCAACTGCTATCAATTGCCTATCAACTCTACTTAAGGAACCTGTAGTTAGGTCTTCCTTTGTTCAAGCTGATGGGGTCAAGTTGCTTGTGCCACTGATTTGTCCAGCATCCACTCAACAATCTATTCAGGGGCCTGCATGA 258 0.4419 ARPSLVVIHDMNPHWEKCPYFVYKMLFDLKKPSHPTRGVPTAINCLSTLLKEPVVRSSFVQADGVKLLVPLICPASTQQSIQGPA 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20497g00001 85 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 24 82 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20497g00001 Trme-Chr20497 303 751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20497g00001 29 82 Primary Pumps ATPases(2) AT3G42050 90.741 1.82e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20497g00001 K02144 - egr:104414045 103.219