Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20464g00001 GATTGTGGGAAGCAGGTCTATTTGGGTGGATTTGACACTGCTCATGCTGCTGCAAGAGCATATGATAGGGCTGCTGTTATGTTTAGGGGAGTTGATGCTGATATAAACTTCATTTTAAGTGATTATGTAGAGGATTTGAAGCAGATGAGAGGTTTGAGTAAGGAAGAATTTATCCAAAGACTTCGAAGACAAACCAATGGAAACTCAAGAAGAAGTTCAACATACAGAAGTATATTACCTCTTCACAAATATGGTCAAGAAGATCCACCATTTGTGGCCAAAACGTGA 288 0.3924 DCGKQVYLGGFDTAHAAARAYDRAAVMFRGVDADINFILSDYVEDLKQMRGLSKEEFIQRLRRQTNGNSRRSSTYRSILPLHKYGQEDPPFVAKT 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20464g00001 95 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2 85 - -
Trme20464g00001 95 Gene3D AP2/ERF domain 1 39 IPR036955 GO:0003700|GO:0006355
Trme20464g00001 95 ProSiteProfiles AP2/ERF domain profile. 1 38 IPR001471 GO:0003700|GO:0006355
Trme20464g00001 95 SMART rav1_2 1 44 IPR001471 GO:0003700|GO:0006355
Trme20464g00001 95 SUPERFAMILY DNA-binding domain 3 39 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20464g00001 Trme-Chr20464 496 1275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20464g00001 1 77 AP2-EREBP Transcription Factor Family AT2G39250 63.636 2.78e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20464g00001 K09284 - gmx:100776138 135.961