Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme204552g00001 ATGGCAGTGAAGGCTTCTGGAGCCTATAAGAATTGTAAGCCTTGTTCAGGATCTTCCAATGGTAACAAGAACAAAAAGTATGCTGATTCTGATATGGGATCAGATTCAGCAAGGTTCAACTGTGCATACCGAAGAACCGGGAGTGCGAGTTCTACACCAAGAATGTGGGGGAAGGAAATGGAAGCTAGACTCAAAGGGATTTCGAGTGGAGAAGGAACACCAACATCGGTGAGTGGACGTACCGAGTCAGTTGTGTTCATGGAAGAAGAGGATGAACCTAAGGAGTGGGTTGCACAAGTTGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCCCAAGGTGGGAATGATCTAAAGAGGATACGGTTCAGGTACTTCCCTTC 383 0.4595 MAVKASGAYKNCKPCSGSSNGNKNKKYADSDMGSDSARFNCAYRRTGSASSTPRMWGKEMEARLKGISSGEGTPTSVSGRTESVVFMEEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFRYFPS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme204552g00001 128 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 124 IPR044532 -
Trme204552g00001 128 ProSiteProfiles BRX domain profile. 94 128 IPR013591 -
Trme204552g00001 128 Pfam Transcription factor regulating root and shoot growth via Pin3 94 124 IPR013591 -
Trme204552g00001 128 MobiDBLite consensus disorder prediction 1 35 - -
Trme204552g00001 128 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme204552g00001 Trme-Chr204552 52 434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme204552g00001 1 123 Major Intrinsic Protein MIP AT1G31880 43.704 2.13e-23 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme204552g00001 - - cave:132186704 223.016