Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme204552g00001 | ATGGCAGTGAAGGCTTCTGGAGCCTATAAGAATTGTAAGCCTTGTTCAGGATCTTCCAATGGTAACAAGAACAAAAAGTATGCTGATTCTGATATGGGATCAGATTCAGCAAGGTTCAACTGTGCATACCGAAGAACCGGGAGTGCGAGTTCTACACCAAGAATGTGGGGGAAGGAAATGGAAGCTAGACTCAAAGGGATTTCGAGTGGAGAAGGAACACCAACATCGGTGAGTGGACGTACCGAGTCAGTTGTGTTCATGGAAGAAGAGGATGAACCTAAGGAGTGGGTTGCACAAGTTGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCCCAAGGTGGGAATGATCTAAAGAGGATACGGTTCAGGTACTTCCCTTC | 383 | 0.4595 | MAVKASGAYKNCKPCSGSSNGNKNKKYADSDMGSDSARFNCAYRRTGSASSTPRMWGKEMEARLKGISSGEGTPTSVSGRTESVVFMEEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFRYFPS | 128 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme204552g00001 | 128 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 1 | 124 | IPR044532 | - | |
Trme204552g00001 | 128 | ProSiteProfiles | BRX domain profile. | 94 | 128 | IPR013591 | - | |
Trme204552g00001 | 128 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 94 | 124 | IPR013591 | - | |
Trme204552g00001 | 128 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Trme204552g00001 | 128 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme204552g00001 | Trme-Chr204552 | 52 | 434 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme204552g00001 | 1 | 123 | Major Intrinsic Protein MIP | AT1G31880 | 43.704 | 2.13e-23 | 91.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme204552g00001 | - | - | cave:132186704 | 223.016 |