Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20439g00001 ATGTATACACTTATGCATAATCTAGGTTGTGAGGCTATGTTTGCAGATTTGGACCACTTCAATGTTGGAGCCATTCGAATTAGCTTTTTATTTATCGCACTTCCCGCAATATTGGCAGCATATAGTGGACAAGTAGCATATCTACGAACATACCCAGCTGATGTGTCAAAGGTTTTCTACGCATCCATACTAGTGTTTGAAAGAGCTTGTACGGTCCTTACGGATTGGCAAATGGCCCAAACAGCACCGAAGAAAAGCATCAACGGGCAACAACAACCAGCGGTAGCAAAGTGGGTAAGGCTGAGTTTGGGTCGCTATAAATGCAATATTGACGCCTCCTTCTTCTCCTCAGGCCTTAATAGAGTTGGCATAGGCACATGTATCAGAGATGATCAAGGCAGATTTGTCGTCGCCAAAACAGAGTGGTTTTCACCTGTTTGTGACGTGGAGATGGRTGAAGCTCAAGGRCTTCTGCAAGCTTTCAAATGGGTTCGAGATTTACAGCTGGAAGATGTTGATTTTGARCTTGATGCGCAAACTGTTGTTACTAAGTTTCATAGTAAAAAGGATGATGTATCTGAATTCGGGGAAGTCATCAAAGATTGTCAATGTTTGCACAACACCTTTTTCAAAAACTCAAAGGTCTAG 648 0.4213 MYTLMHNLGCEAMFADLDHFNVGAIRISFLFIALPAILAAYSGQVAYLRTYPADVSKVFYASILVFERACTVLTDWQMAQTAPKKSINGQQQPAVAKWVRLSLGRYKCNIDASFFSSGLNRVGIGTCIRDDQGRFVVAKTEWFSPVCDVEMXEAQGLLQAFKWVRDLQLEDVDFELDAQTVVTKFHSKKDDVSEFGEVIKDCQCLHNTFFKNSKV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20439g00001 215 Gene3D - 104 214 IPR036397 GO:0003676
Trme20439g00001 215 Pfam K+ potassium transporter 9 63 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trme20439g00001 215 CDD RNase_H_like 108 209 IPR044730 -
Trme20439g00001 215 PANTHER BNAC02G40300D PROTEIN 69 207 - -
Trme20439g00001 215 Pfam Reverse transcriptase-like 110 209 IPR002156 GO:0003676|GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20439g00001 Trme-Chr20439 121 1249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20439g00001 9 63 Inorganic Solute Cotransporters AT2G35060 56.364 7.32e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20439g00001 - - tpra:123922392 176.022