Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20425g00001 ATGAAGAAATTCACAAGACCGTCTTCAGCAGTTCATCCGGTTTCTTCTAAGCACAAAATTCTTGATCCAAAGGGGCCAATGCTTCAGACATGGAACAAAATCTTTGTAATCACATGTGTTATGGCAGTTTCTGTTGACCCTCTTTTCTTTTACATTCCGGTGATTGTTGGAAAAGACAAATGTCTTCATTTGGATCAACCGTTGCAGACTACTGCCACTGTTCTTCGCACATTCTTTGATCTTTTCTACATTCTTCGCATCATCTTTCAATTTAGAACTGGATTTCTTGCACCTTCTTCTCGTGTTTTTGGAAGTGGTGAACTCGTTCACGATCCTGTCGCCATAATGAAAAGATACTCATTGAGTTCTCATTTCATCATCGACATTCTTTCAGTTATTCCACTTCCACAG 411 0.3942 MKKFTRPSSAVHPVSSKHKILDPKGPMLQTWNKIFVITCVMAVSVDPLFFYIPVIVGKDKCLHLDQPLQTTATVLRTFFDLFYILRIIFQFRTGFLAPSSRVFGSGELVHDPVAIMKRYSLSSHFIIDILSVIPLPQ 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20425g00001 137 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 137 - -
Trme20425g00001 137 SUPERFAMILY Voltage-gated potassium channels 22 136 - -
Trme20425g00001 137 Pfam Ion transport protein 29 136 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20425g00001 Trme-Chr20425 277 687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20425g00001 2 137 Ion Channels AT5G53130 61.765 2.07e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20425g00001 K05391 - gmx:100797784 202.601