Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme204205g00001 GACATTTTTGGTGCTGGAGGTGAGACATCAGCAATCACCATAGAATGGGCAATGGTAGAAATGATAAGGAATCCAAGAATAATGAAGAAAGCTCAAGCTGAGGTGAGAGAGGTTTTCAAAATGAAAGGAAGGGTTGATGAAAACTGCATCAATGAACTCAATTATTTGAAATTAGTTGTCAAAGAAACCCTGAGGTTATACACTCCAGCACCTCTTTTGCTACCAAGAGAATGTGGTGAAGCATGTGAGATAAATGGTTATCACATACCGATTAAGACTATGGTGATAGTCAATGCTTGGGCAATTGCAAGAGATCCAAACTACTGGACCGAACCAGAAAGGTTTTATCCAGAGAGATTC 360 0.3972 DIFGAGGETSAITIEWAMVEMIRNPRIMKKAQAEVREVFKMKGRVDENCINELNYLKLVVKETLRLYTPAPLLLPRECGEACEINGYHIPIKTMVIVNAWAIARDPNYWTEPERFYPERF 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme204205g00001 120 PANTHER OS08G0105600 PROTEIN 1 120 - -
Trme204205g00001 120 SUPERFAMILY Cytochrome P450 1 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme204205g00001 120 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme204205g00001 120 PRINTS E-class P450 group I signature 98 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme204205g00001 120 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme204205g00001 120 Pfam Cytochrome P450 1 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme204205g00001 120 Gene3D Cytochrome P450 1 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme204205g00001 120 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme204205g00001 120 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme204205g00001 Trme-Chr204205 76 435 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme204205g00001 1 120 Cytochrome P450 AT3G26230 54.918 2.44e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme204205g00001 - - tpra:123912942 218.009