Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20409g00001 ATGGTAGTTGTGTGGACAGTTTTCTCATTCGCAGTAGTAACAAGTAAAGTTCCTTCGGGAGTTCCGAGAAGACTCATTGCACCTGTAGCTTGGGAATCTACATCATTACATCACTGGACAGTGATCAAAGATATGGGGAAGGTTTCTCCAACACACATTTTTGAGGCTTTTATTCCTGCCATAATGATAGCAGGACTTTACTTCTTTGACCATAGTGTTGCATCCCAATTGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCGGCATATCACTATGACATATTGTTGCTAGGATTCATGACTTTGCTTTGTGGACTAATTGGCTTGCCTCCTTCAAATGGAGTTCTGCCTCAATCCCCTATGCACACCAAGAGTCTGGCTGTTCTCAAGAAACAGTTGATCCGACGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAAGACTGAAAGCTAGCAATTCTGAAATATATGGGAAAATGCAAGAAGTGTTTATAGAAATGGATCATAATCCTAATAATAATTCAGTGGTAAAAGAACTAGAGGATTTGAAAGATGTTGTCCTAAATGGTGAAGATAAAGGAGACAACAATAAGAACACATTTGATCCTGAGAAACACA 619 0.391 MVVVWTVFSFAVVTSKVPSGVPRRLIAPVAWESTSLHHWTVIKDMGKVSPTHIFEAFIPAIMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIRLKASNSEIYGKMQEVFIEMDHNPNNNSVVKELEDLKDVVLNGEDKGDNNKNTFDPEKH 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20409g00001 206 PANTHER ANION EXCHANGE PROTEIN 1 145 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trme20409g00001 206 Pfam HCO3- transporter family 3 133 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20409g00001 Trme-Chr20409 1 1309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20409g00001 1 206 Antiporters AT1G15460 72.986 1.69e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20409g00001 K24194 - gmx:100811184 342.428