Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme204020g00001 ATGATGGAAGGTGAGGCTGCAAAAGCATTGACAAACCAACGTGAGATGAACGAAGGGAAAGAAAAATGGTGTGAAAGAATGAAAGAAGCAGGATTTGCAGGTGAAGTATTTGGAGAGGATGCAATTGATGGAGGTCGAGCTTTGTTAAGGAAGTATGATAATAATTGGGAGATGAAAGTAGAAGAAGAGAACAGTACAACTGTGGGACTATGGTGGAAGGGTCAACCTGTTTCTTTCTGTTCTTTGTGGAAACTGGATAAACAGAGTAGTTCAAGCTCAACATTGACAGCAAGGTAG 297 0.4108 MMEGEAAKALTNQREMNEGKEKWCERMKEAGFAGEVFGEDAIDGGRALLRKYDNNWEMKVEEENSTTVGLWWKGQPVSFCSLWKLDKQSSSSSTLTAR 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme204020g00001 98 MobiDBLite consensus disorder prediction 1 21 - -
Trme204020g00001 98 Pfam GRAS domain family 11 84 IPR005202 -
Trme204020g00001 98 ProSiteProfiles GRAS family profile. 1 84 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme204020g00001 1 84 GRAS Transcription Factor Family AT3G13840 65.476 5.34e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme204020g00001 GRAS 1.8e-13 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme204020g00001 - - mtr:11434050 172.555